Gene : Thecc1EG001361 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1173
Name:  ? Thecc1EG001361 Secondary Identifier:  ? PAC:27434333
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001361 0.5kb upstream 0.5kb upstream 8046 true scaffold_1: 6694805-6702850 Theobroma cacao
Thecc1EG001361 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6702351-6702850 Theobroma cacao
Thecc1EG001361 0.5kb downstream 0.5kb downstream 8046 true scaffold_1: 6694305-6702350 Theobroma cacao
Thecc1EG001361 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6694305-6694804 Theobroma cacao
Thecc1EG001361 1.0kb upstream 1.0kb upstream 8546 true scaffold_1: 6694805-6703350 Theobroma cacao
Thecc1EG001361 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6702351-6703350 Theobroma cacao
Thecc1EG001361 1.0kb downstream 1.0kb downstream 8546 true scaffold_1: 6693805-6702350 Theobroma cacao
Thecc1EG001361 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6693805-6694804 Theobroma cacao
Thecc1EG001361 2.0kb upstream 2.0kb upstream 9546 true scaffold_1: 6694805-6704350 Theobroma cacao
Thecc1EG001361 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6702351-6704350 Theobroma cacao
Thecc1EG001361 2.0kb downstream 2.0kb downstream 9546 true scaffold_1: 6692805-6702350 Theobroma cacao
Thecc1EG001361 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6692805-6694804 Theobroma cacao
Thecc1EG001361 5.0kb upstream 5.0kb upstream 12546 true scaffold_1: 6694805-6707350 Theobroma cacao
Thecc1EG001361 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6702351-6707350 Theobroma cacao
Thecc1EG001361 5.0kb downstream 5.0kb downstream 12546 true scaffold_1: 6689805-6702350 Theobroma cacao
Thecc1EG001361 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6689805-6694804 Theobroma cacao
Thecc1EG001361 10.0kb upstream 10.0kb upstream 17546 true scaffold_1: 6694805-6712350 Theobroma cacao
Thecc1EG001361 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6702351-6712350 Theobroma cacao
Thecc1EG001361 10.0kb downstream 10.0kb downstream 17546 true scaffold_1: 6684805-6702350 Theobroma cacao
Thecc1EG001361 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6684805-6694804 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828334 5264 Brassicales-Malvales View MSA
124343767 5266 SBM View MSA
124243601 5268 Malvidae View MSA
124065007 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain