Gene : Thecc1EG001535 T. cacao v1.1
Defline:  (1 of 1) PTHR10857//PTHR10857:SF18 - COPINE // SUBFAMILY NOT NAMED Genomic Order:  1316
Name:  ? Thecc1EG001535 Secondary Identifier:  ? PAC:27435713
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001535 0.5kb upstream 0.5kb upstream 11588 true scaffold_1: 7737050-7748637 Theobroma cacao
Thecc1EG001535 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7737050-7737549 Theobroma cacao
Thecc1EG001535 0.5kb downstream 0.5kb downstream 11588 true scaffold_1: 7737550-7749137 Theobroma cacao
Thecc1EG001535 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7748638-7749137 Theobroma cacao
Thecc1EG001535 1.0kb upstream 1.0kb upstream 12088 true scaffold_1: 7736550-7748637 Theobroma cacao
Thecc1EG001535 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7736550-7737549 Theobroma cacao
Thecc1EG001535 1.0kb downstream 1.0kb downstream 12088 true scaffold_1: 7737550-7749637 Theobroma cacao
Thecc1EG001535 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7748638-7749637 Theobroma cacao
Thecc1EG001535 2.0kb upstream 2.0kb upstream 13088 true scaffold_1: 7735550-7748637 Theobroma cacao
Thecc1EG001535 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7735550-7737549 Theobroma cacao
Thecc1EG001535 2.0kb downstream 2.0kb downstream 13088 true scaffold_1: 7737550-7750637 Theobroma cacao
Thecc1EG001535 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7748638-7750637 Theobroma cacao
Thecc1EG001535 5.0kb upstream 5.0kb upstream 16088 true scaffold_1: 7732550-7748637 Theobroma cacao
Thecc1EG001535 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7732550-7737549 Theobroma cacao
Thecc1EG001535 5.0kb downstream 5.0kb downstream 16088 true scaffold_1: 7737550-7753637 Theobroma cacao
Thecc1EG001535 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7748638-7753637 Theobroma cacao
Thecc1EG001535 10.0kb upstream 10.0kb upstream 21088 true scaffold_1: 7727550-7748637 Theobroma cacao
Thecc1EG001535 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7727550-7737549 Theobroma cacao
Thecc1EG001535 10.0kb downstream 10.0kb downstream 21088 true scaffold_1: 7737550-7758637 Theobroma cacao
Thecc1EG001535 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7748638-7758637 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833694 5264 Brassicales-Malvales View MSA
124344728 5266 SBM View MSA
124239338 5268 Malvidae View MSA
124066456 5270 Rosid View MSA
123739278 5271 Pentapetalae View MSA
122792027 5272 Eudicot View MSA
122050379 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain