Gene : Thecc1EG001533 T. cacao v1.1
Defline:  (1 of 1) 2.4.1.142 - Chitobiosyldiphosphodolichol beta-mannosyltransferase / mannosyltransferase Genomic Order:  1314
Name:  ? Thecc1EG001533 Secondary Identifier:  ? PAC:27434437
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001533 0.5kb upstream 0.5kb upstream 8134 true scaffold_1: 7709206-7717339 Theobroma cacao
Thecc1EG001533 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7716840-7717339 Theobroma cacao
Thecc1EG001533 0.5kb downstream 0.5kb downstream 8134 true scaffold_1: 7708706-7716839 Theobroma cacao
Thecc1EG001533 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7708706-7709205 Theobroma cacao
Thecc1EG001533 1.0kb upstream 1.0kb upstream 8634 true scaffold_1: 7709206-7717839 Theobroma cacao
Thecc1EG001533 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7716840-7717839 Theobroma cacao
Thecc1EG001533 1.0kb downstream 1.0kb downstream 8634 true scaffold_1: 7708206-7716839 Theobroma cacao
Thecc1EG001533 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7708206-7709205 Theobroma cacao
Thecc1EG001533 2.0kb upstream 2.0kb upstream 9634 true scaffold_1: 7709206-7718839 Theobroma cacao
Thecc1EG001533 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7716840-7718839 Theobroma cacao
Thecc1EG001533 2.0kb downstream 2.0kb downstream 9634 true scaffold_1: 7707206-7716839 Theobroma cacao
Thecc1EG001533 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7707206-7709205 Theobroma cacao
Thecc1EG001533 5.0kb upstream 5.0kb upstream 12634 true scaffold_1: 7709206-7721839 Theobroma cacao
Thecc1EG001533 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7716840-7721839 Theobroma cacao
Thecc1EG001533 5.0kb downstream 5.0kb downstream 12634 true scaffold_1: 7704206-7716839 Theobroma cacao
Thecc1EG001533 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7704206-7709205 Theobroma cacao
Thecc1EG001533 10.0kb upstream 10.0kb upstream 17634 true scaffold_1: 7709206-7726839 Theobroma cacao
Thecc1EG001533 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7716840-7726839 Theobroma cacao
Thecc1EG001533 10.0kb downstream 10.0kb downstream 17634 true scaffold_1: 7699206-7716839 Theobroma cacao
Thecc1EG001533 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7699206-7709205 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833057 5264 Brassicales-Malvales View MSA
124338291 5266 SBM View MSA
124241218 5268 Malvidae View MSA
124066723 5270 Rosid View MSA
123740447 5271 Pentapetalae View MSA
122785906 5272 Eudicot View MSA
122046211 5273 Angiosperm View MSA
123429023 5275 Viridiplantae View MSA
121347340 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain