Gene : Thecc1EG002023 T. cacao v1.1
Defline:  (1 of 1) PTHR18937//PTHR18937:SF225 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  1673
Name:  ? Thecc1EG002023 Secondary Identifier:  ? PAC:27437375
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002023 0.5kb upstream 0.5kb upstream 12334 true scaffold_1: 11049068-11061401 Theobroma cacao
Thecc1EG002023 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11060902-11061401 Theobroma cacao
Thecc1EG002023 0.5kb downstream 0.5kb downstream 12334 true scaffold_1: 11048568-11060901 Theobroma cacao
Thecc1EG002023 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11048568-11049067 Theobroma cacao
Thecc1EG002023 1.0kb upstream 1.0kb upstream 12834 true scaffold_1: 11049068-11061901 Theobroma cacao
Thecc1EG002023 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11060902-11061901 Theobroma cacao
Thecc1EG002023 1.0kb downstream 1.0kb downstream 12834 true scaffold_1: 11048068-11060901 Theobroma cacao
Thecc1EG002023 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11048068-11049067 Theobroma cacao
Thecc1EG002023 2.0kb upstream 2.0kb upstream 13834 true scaffold_1: 11049068-11062901 Theobroma cacao
Thecc1EG002023 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11060902-11062901 Theobroma cacao
Thecc1EG002023 2.0kb downstream 2.0kb downstream 13834 true scaffold_1: 11047068-11060901 Theobroma cacao
Thecc1EG002023 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11047068-11049067 Theobroma cacao
Thecc1EG002023 5.0kb upstream 5.0kb upstream 16834 true scaffold_1: 11049068-11065901 Theobroma cacao
Thecc1EG002023 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11060902-11065901 Theobroma cacao
Thecc1EG002023 5.0kb downstream 5.0kb downstream 16834 true scaffold_1: 11044068-11060901 Theobroma cacao
Thecc1EG002023 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11044068-11049067 Theobroma cacao
Thecc1EG002023 10.0kb upstream 10.0kb upstream 21834 true scaffold_1: 11049068-11070901 Theobroma cacao
Thecc1EG002023 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11060902-11070901 Theobroma cacao
Thecc1EG002023 10.0kb downstream 10.0kb downstream 21834 true scaffold_1: 11039068-11060901 Theobroma cacao
Thecc1EG002023 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11039068-11049067 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829449 5264 Brassicales-Malvales View MSA
124343010 5266 SBM View MSA
124252875 5268 Malvidae View MSA
124066558 5270 Rosid View MSA
123748298 5271 Pentapetalae View MSA
122786637 5272 Eudicot View MSA
122049779 5273 Angiosperm View MSA
121351769 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain