Gene : Thecc1EG002255 T. cacao v1.1

Defline:  (1 of 2) PF07172 - Glycine rich protein family (GRP) Genomic Order:  1814
Name:  ? Thecc1EG002255 Secondary Identifier:  ? PAC:27434019

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002255 0.5kb upstream 0.5kb upstream 1570 true scaffold_1: 12681299-12682868 Theobroma cacao
Thecc1EG002255 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 12682369-12682868 Theobroma cacao
Thecc1EG002255 0.5kb downstream 0.5kb downstream 1570 true scaffold_1: 12680799-12682368 Theobroma cacao
Thecc1EG002255 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 12680799-12681298 Theobroma cacao
Thecc1EG002255 1.0kb upstream 1.0kb upstream 2070 true scaffold_1: 12681299-12683368 Theobroma cacao
Thecc1EG002255 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 12682369-12683368 Theobroma cacao
Thecc1EG002255 1.0kb downstream 1.0kb downstream 2070 true scaffold_1: 12680299-12682368 Theobroma cacao
Thecc1EG002255 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 12680299-12681298 Theobroma cacao
Thecc1EG002255 2.0kb upstream 2.0kb upstream 3070 true scaffold_1: 12681299-12684368 Theobroma cacao
Thecc1EG002255 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 12682369-12684368 Theobroma cacao
Thecc1EG002255 2.0kb downstream 2.0kb downstream 3070 true scaffold_1: 12679299-12682368 Theobroma cacao
Thecc1EG002255 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 12679299-12681298 Theobroma cacao
Thecc1EG002255 5.0kb upstream 5.0kb upstream 6070 true scaffold_1: 12681299-12687368 Theobroma cacao
Thecc1EG002255 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 12682369-12687368 Theobroma cacao
Thecc1EG002255 5.0kb downstream 5.0kb downstream 6070 true scaffold_1: 12676299-12682368 Theobroma cacao
Thecc1EG002255 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 12676299-12681298 Theobroma cacao
Thecc1EG002255 10.0kb upstream 10.0kb upstream 11070 true scaffold_1: 12681299-12692368 Theobroma cacao
Thecc1EG002255 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 12682369-12692368 Theobroma cacao
Thecc1EG002255 10.0kb downstream 10.0kb downstream 11070 true scaffold_1: 12671299-12682368 Theobroma cacao
Thecc1EG002255 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 12671299-12681298 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837571 5264 Brassicales-Malvales View MSA
124346130 5266 SBM View MSA
124249134 5268 Malvidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain