Gene : Thecc1EG002154 T. cacao v1.1
Defline:  (1 of 215) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  1756
Name:  ? Thecc1EG002154 Secondary Identifier:  ? PAC:27437326
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002154 0.5kb upstream 0.5kb upstream 3287 true scaffold_1: 12024487-12027773 Theobroma cacao
Thecc1EG002154 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 12027274-12027773 Theobroma cacao
Thecc1EG002154 0.5kb downstream 0.5kb downstream 3287 true scaffold_1: 12023987-12027273 Theobroma cacao
Thecc1EG002154 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 12023987-12024486 Theobroma cacao
Thecc1EG002154 1.0kb upstream 1.0kb upstream 3787 true scaffold_1: 12024487-12028273 Theobroma cacao
Thecc1EG002154 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 12027274-12028273 Theobroma cacao
Thecc1EG002154 1.0kb downstream 1.0kb downstream 3787 true scaffold_1: 12023487-12027273 Theobroma cacao
Thecc1EG002154 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 12023487-12024486 Theobroma cacao
Thecc1EG002154 2.0kb upstream 2.0kb upstream 4787 true scaffold_1: 12024487-12029273 Theobroma cacao
Thecc1EG002154 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 12027274-12029273 Theobroma cacao
Thecc1EG002154 2.0kb downstream 2.0kb downstream 4787 true scaffold_1: 12022487-12027273 Theobroma cacao
Thecc1EG002154 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 12022487-12024486 Theobroma cacao
Thecc1EG002154 5.0kb upstream 5.0kb upstream 7787 true scaffold_1: 12024487-12032273 Theobroma cacao
Thecc1EG002154 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 12027274-12032273 Theobroma cacao
Thecc1EG002154 5.0kb downstream 5.0kb downstream 7787 true scaffold_1: 12019487-12027273 Theobroma cacao
Thecc1EG002154 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 12019487-12024486 Theobroma cacao
Thecc1EG002154 10.0kb upstream 10.0kb upstream 12787 true scaffold_1: 12024487-12037273 Theobroma cacao
Thecc1EG002154 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 12027274-12037273 Theobroma cacao
Thecc1EG002154 10.0kb downstream 10.0kb downstream 12787 true scaffold_1: 12014487-12027273 Theobroma cacao
Thecc1EG002154 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 12014487-12024486 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831964 5264 Brassicales-Malvales View MSA
124337989 5266 SBM View MSA
124239809 5268 Malvidae View MSA
124068279 5270 Rosid View MSA
123741422 5271 Pentapetalae View MSA
122786539 5272 Eudicot View MSA
122041629 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121309872 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain