Gene : Thecc1EG002524 T. cacao v1.1
Defline:  (1 of 1) K08909 - light-harvesting complex I chlorophyll a/b binding protein 3 (LHCA3) Genomic Order:  1974
Name:  ? Thecc1EG002524 Secondary Identifier:  ? PAC:27432916
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002524 0.5kb upstream 0.5kb upstream 1905 true scaffold_1: 14476174-14478078 Theobroma cacao
Thecc1EG002524 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14477579-14478078 Theobroma cacao
Thecc1EG002524 0.5kb downstream 0.5kb downstream 1905 true scaffold_1: 14475674-14477578 Theobroma cacao
Thecc1EG002524 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14475674-14476173 Theobroma cacao
Thecc1EG002524 1.0kb upstream 1.0kb upstream 2405 true scaffold_1: 14476174-14478578 Theobroma cacao
Thecc1EG002524 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14477579-14478578 Theobroma cacao
Thecc1EG002524 1.0kb downstream 1.0kb downstream 2405 true scaffold_1: 14475174-14477578 Theobroma cacao
Thecc1EG002524 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14475174-14476173 Theobroma cacao
Thecc1EG002524 2.0kb upstream 2.0kb upstream 3405 true scaffold_1: 14476174-14479578 Theobroma cacao
Thecc1EG002524 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14477579-14479578 Theobroma cacao
Thecc1EG002524 2.0kb downstream 2.0kb downstream 3405 true scaffold_1: 14474174-14477578 Theobroma cacao
Thecc1EG002524 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14474174-14476173 Theobroma cacao
Thecc1EG002524 5.0kb upstream 5.0kb upstream 6405 true scaffold_1: 14476174-14482578 Theobroma cacao
Thecc1EG002524 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14477579-14482578 Theobroma cacao
Thecc1EG002524 5.0kb downstream 5.0kb downstream 6405 true scaffold_1: 14471174-14477578 Theobroma cacao
Thecc1EG002524 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14471174-14476173 Theobroma cacao
Thecc1EG002524 10.0kb upstream 10.0kb upstream 11405 true scaffold_1: 14476174-14487578 Theobroma cacao
Thecc1EG002524 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14477579-14487578 Theobroma cacao
Thecc1EG002524 10.0kb downstream 10.0kb downstream 11405 true scaffold_1: 14466174-14477578 Theobroma cacao
Thecc1EG002524 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14466174-14476173 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040894 5273 Angiosperm View MSA
123832793 5264 Brassicales-Malvales View MSA
124345980 5266 SBM View MSA
124237525 5268 Malvidae View MSA
124067317 5270 Rosid View MSA
123739119 5271 Pentapetalae View MSA
122792428 5272 Eudicot View MSA
121345574 5274 Embryophyte View MSA
123424103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain