Gene : Thecc1EG002492 T. cacao v1.1
Defline:  (1 of 2) PTHR22572//PTHR22572:SF101 - SUGAR-1-PHOSPHATE GUANYL TRANSFERASE // GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  1955
Name:  ? Thecc1EG002492 Secondary Identifier:  ? PAC:27436128
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLYCOGENSYNTH-PWY Theobroma cacao pathologic  
Tcacao PWY-622 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002492 0.5kb upstream 0.5kb upstream 5093 true scaffold_1: 14264645-14269737 Theobroma cacao
Thecc1EG002492 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14264645-14265144 Theobroma cacao
Thecc1EG002492 0.5kb downstream 0.5kb downstream 5093 true scaffold_1: 14265145-14270237 Theobroma cacao
Thecc1EG002492 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14269738-14270237 Theobroma cacao
Thecc1EG002492 1.0kb upstream 1.0kb upstream 5593 true scaffold_1: 14264145-14269737 Theobroma cacao
Thecc1EG002492 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14264145-14265144 Theobroma cacao
Thecc1EG002492 1.0kb downstream 1.0kb downstream 5593 true scaffold_1: 14265145-14270737 Theobroma cacao
Thecc1EG002492 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14269738-14270737 Theobroma cacao
Thecc1EG002492 2.0kb upstream 2.0kb upstream 6593 true scaffold_1: 14263145-14269737 Theobroma cacao
Thecc1EG002492 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14263145-14265144 Theobroma cacao
Thecc1EG002492 2.0kb downstream 2.0kb downstream 6593 true scaffold_1: 14265145-14271737 Theobroma cacao
Thecc1EG002492 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14269738-14271737 Theobroma cacao
Thecc1EG002492 5.0kb upstream 5.0kb upstream 9593 true scaffold_1: 14260145-14269737 Theobroma cacao
Thecc1EG002492 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14260145-14265144 Theobroma cacao
Thecc1EG002492 5.0kb downstream 5.0kb downstream 9593 true scaffold_1: 14265145-14274737 Theobroma cacao
Thecc1EG002492 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14269738-14274737 Theobroma cacao
Thecc1EG002492 10.0kb upstream 10.0kb upstream 14593 true scaffold_1: 14255145-14269737 Theobroma cacao
Thecc1EG002492 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14255145-14265144 Theobroma cacao
Thecc1EG002492 10.0kb downstream 10.0kb downstream 14593 true scaffold_1: 14265145-14279737 Theobroma cacao
Thecc1EG002492 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14269738-14279737 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836919 5264 Brassicales-Malvales View MSA
124346329 5266 SBM View MSA
124239749 5268 Malvidae View MSA
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain