Gene : Thecc1EG002474 T. cacao v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF104 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  1947
Name:  ? Thecc1EG002474 Secondary Identifier:  ? PAC:27433355
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5980 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002474 0.5kb upstream 0.5kb upstream 3199 true scaffold_1: 14114964-14118162 Theobroma cacao
Thecc1EG002474 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14114964-14115463 Theobroma cacao
Thecc1EG002474 0.5kb downstream 0.5kb downstream 3199 true scaffold_1: 14115464-14118662 Theobroma cacao
Thecc1EG002474 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14118163-14118662 Theobroma cacao
Thecc1EG002474 1.0kb upstream 1.0kb upstream 3699 true scaffold_1: 14114464-14118162 Theobroma cacao
Thecc1EG002474 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14114464-14115463 Theobroma cacao
Thecc1EG002474 1.0kb downstream 1.0kb downstream 3699 true scaffold_1: 14115464-14119162 Theobroma cacao
Thecc1EG002474 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14118163-14119162 Theobroma cacao
Thecc1EG002474 2.0kb upstream 2.0kb upstream 4699 true scaffold_1: 14113464-14118162 Theobroma cacao
Thecc1EG002474 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14113464-14115463 Theobroma cacao
Thecc1EG002474 2.0kb downstream 2.0kb downstream 4699 true scaffold_1: 14115464-14120162 Theobroma cacao
Thecc1EG002474 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14118163-14120162 Theobroma cacao
Thecc1EG002474 5.0kb upstream 5.0kb upstream 7699 true scaffold_1: 14110464-14118162 Theobroma cacao
Thecc1EG002474 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14110464-14115463 Theobroma cacao
Thecc1EG002474 5.0kb downstream 5.0kb downstream 7699 true scaffold_1: 14115464-14123162 Theobroma cacao
Thecc1EG002474 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14118163-14123162 Theobroma cacao
Thecc1EG002474 10.0kb upstream 10.0kb upstream 12699 true scaffold_1: 14105464-14118162 Theobroma cacao
Thecc1EG002474 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14105464-14115463 Theobroma cacao
Thecc1EG002474 10.0kb downstream 10.0kb downstream 12699 true scaffold_1: 14115464-14128162 Theobroma cacao
Thecc1EG002474 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14118163-14128162 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825104 5264 Brassicales-Malvales View MSA
124347112 5266 SBM View MSA
124246530 5268 Malvidae View MSA
124070625 5270 Rosid View MSA
123746709 5271 Pentapetalae View MSA
122795318 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain