Gene : Thecc1EG002658 T. cacao v1.1
Defline:  (1 of 2) PTHR11771//PTHR11771:SF59 - LIPOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  2041
Name:  ? Thecc1EG002658 Secondary Identifier:  ? PAC:27435599
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002658 0.5kb upstream 0.5kb upstream 5554 true scaffold_1: 15477628-15483181 Theobroma cacao
Thecc1EG002658 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15477628-15478127 Theobroma cacao
Thecc1EG002658 0.5kb downstream 0.5kb downstream 5554 true scaffold_1: 15478128-15483681 Theobroma cacao
Thecc1EG002658 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15483182-15483681 Theobroma cacao
Thecc1EG002658 1.0kb upstream 1.0kb upstream 6054 true scaffold_1: 15477128-15483181 Theobroma cacao
Thecc1EG002658 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15477128-15478127 Theobroma cacao
Thecc1EG002658 1.0kb downstream 1.0kb downstream 6054 true scaffold_1: 15478128-15484181 Theobroma cacao
Thecc1EG002658 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15483182-15484181 Theobroma cacao
Thecc1EG002658 2.0kb upstream 2.0kb upstream 7054 true scaffold_1: 15476128-15483181 Theobroma cacao
Thecc1EG002658 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15476128-15478127 Theobroma cacao
Thecc1EG002658 2.0kb downstream 2.0kb downstream 7054 true scaffold_1: 15478128-15485181 Theobroma cacao
Thecc1EG002658 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15483182-15485181 Theobroma cacao
Thecc1EG002658 5.0kb upstream 5.0kb upstream 10054 true scaffold_1: 15473128-15483181 Theobroma cacao
Thecc1EG002658 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15473128-15478127 Theobroma cacao
Thecc1EG002658 5.0kb downstream 5.0kb downstream 10054 true scaffold_1: 15478128-15488181 Theobroma cacao
Thecc1EG002658 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15483182-15488181 Theobroma cacao
Thecc1EG002658 10.0kb upstream 10.0kb upstream 15054 true scaffold_1: 15468128-15483181 Theobroma cacao
Thecc1EG002658 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15468128-15478127 Theobroma cacao
Thecc1EG002658 10.0kb downstream 10.0kb downstream 15054 true scaffold_1: 15478128-15493181 Theobroma cacao
Thecc1EG002658 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15483182-15493181 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123815493 5264 Brassicales-Malvales Singleton cluster - no MSA
124311925 5266 SBM Singleton cluster - no MSA
124251684 5268 Malvidae View MSA
124071264 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain