Gene : Thecc1EG002640 T. cacao v1.1
Defline:  (1 of 2) PTHR14083:SF5 - HRF1 PROTEIN Genomic Order:  2029
Name:  ? Thecc1EG002640 Secondary Identifier:  ? PAC:27435670
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002640 0.5kb upstream 0.5kb upstream 3366 true scaffold_1: 15373573-15376938 Theobroma cacao
Thecc1EG002640 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15373573-15374072 Theobroma cacao
Thecc1EG002640 0.5kb downstream 0.5kb downstream 3366 true scaffold_1: 15374073-15377438 Theobroma cacao
Thecc1EG002640 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15376939-15377438 Theobroma cacao
Thecc1EG002640 1.0kb upstream 1.0kb upstream 3866 true scaffold_1: 15373073-15376938 Theobroma cacao
Thecc1EG002640 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15373073-15374072 Theobroma cacao
Thecc1EG002640 1.0kb downstream 1.0kb downstream 3866 true scaffold_1: 15374073-15377938 Theobroma cacao
Thecc1EG002640 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15376939-15377938 Theobroma cacao
Thecc1EG002640 2.0kb upstream 2.0kb upstream 4866 true scaffold_1: 15372073-15376938 Theobroma cacao
Thecc1EG002640 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15372073-15374072 Theobroma cacao
Thecc1EG002640 2.0kb downstream 2.0kb downstream 4866 true scaffold_1: 15374073-15378938 Theobroma cacao
Thecc1EG002640 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15376939-15378938 Theobroma cacao
Thecc1EG002640 5.0kb upstream 5.0kb upstream 7866 true scaffold_1: 15369073-15376938 Theobroma cacao
Thecc1EG002640 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15369073-15374072 Theobroma cacao
Thecc1EG002640 5.0kb downstream 5.0kb downstream 7866 true scaffold_1: 15374073-15381938 Theobroma cacao
Thecc1EG002640 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15376939-15381938 Theobroma cacao
Thecc1EG002640 10.0kb upstream 10.0kb upstream 12866 true scaffold_1: 15364073-15376938 Theobroma cacao
Thecc1EG002640 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15364073-15374072 Theobroma cacao
Thecc1EG002640 10.0kb downstream 10.0kb downstream 12866 true scaffold_1: 15374073-15386938 Theobroma cacao
Thecc1EG002640 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15376939-15386938 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123815481 5264 Brassicales-Malvales Singleton cluster - no MSA
124311913 5266 SBM Singleton cluster - no MSA
124161136 5268 Malvidae Singleton cluster - no MSA
124038064 5270 Rosid View MSA
123752428 5271 Pentapetalae View MSA
122785612 5272 Eudicot View MSA
122043920 5273 Angiosperm View MSA
121346017 5274 Embryophyte View MSA
123427563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain