Gene : Thecc1EG002626 T. cacao v1.1

Defline:  (1 of 19) K05387 - glutamate receptor, ionotropic, plant (GRIP) Genomic Order:  2024
Name:  ? Thecc1EG002626 Secondary Identifier:  ? PAC:27434086

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002626 0.5kb upstream 0.5kb upstream 7397 true scaffold_1: 15229084-15236480 Theobroma cacao
Thecc1EG002626 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15229084-15229583 Theobroma cacao
Thecc1EG002626 0.5kb downstream 0.5kb downstream 7397 true scaffold_1: 15229584-15236980 Theobroma cacao
Thecc1EG002626 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15236481-15236980 Theobroma cacao
Thecc1EG002626 1.0kb upstream 1.0kb upstream 7897 true scaffold_1: 15228584-15236480 Theobroma cacao
Thecc1EG002626 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15228584-15229583 Theobroma cacao
Thecc1EG002626 1.0kb downstream 1.0kb downstream 7897 true scaffold_1: 15229584-15237480 Theobroma cacao
Thecc1EG002626 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15236481-15237480 Theobroma cacao
Thecc1EG002626 2.0kb upstream 2.0kb upstream 8897 true scaffold_1: 15227584-15236480 Theobroma cacao
Thecc1EG002626 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15227584-15229583 Theobroma cacao
Thecc1EG002626 2.0kb downstream 2.0kb downstream 8897 true scaffold_1: 15229584-15238480 Theobroma cacao
Thecc1EG002626 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15236481-15238480 Theobroma cacao
Thecc1EG002626 5.0kb upstream 5.0kb upstream 11897 true scaffold_1: 15224584-15236480 Theobroma cacao
Thecc1EG002626 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15224584-15229583 Theobroma cacao
Thecc1EG002626 5.0kb downstream 5.0kb downstream 11897 true scaffold_1: 15229584-15241480 Theobroma cacao
Thecc1EG002626 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15236481-15241480 Theobroma cacao
Thecc1EG002626 10.0kb upstream 10.0kb upstream 16897 true scaffold_1: 15219584-15236480 Theobroma cacao
Thecc1EG002626 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15219584-15229583 Theobroma cacao
Thecc1EG002626 10.0kb downstream 10.0kb downstream 16897 true scaffold_1: 15229584-15246480 Theobroma cacao
Thecc1EG002626 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15236481-15246480 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827743 5264 Brassicales-Malvales View MSA
124347411 5266 SBM View MSA
124255377 5268 Malvidae View MSA
124039054 5270 Rosid View MSA
123753015 5271 Pentapetalae View MSA
122797408 5272 Eudicot View MSA
122051662 5273 Angiosperm View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain