Gene : Thecc1EG002972 T. cacao v1.1

Defline:  (1 of 1) PF12452 - Protein of unknown function (DUF3685) (DUF3685) Genomic Order:  2224
Name:  ? Thecc1EG002972 Secondary Identifier:  ? PAC:27432624

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002972 0.5kb upstream 0.5kb upstream 7603 true scaffold_1: 17781024-17788626 Theobroma cacao
Thecc1EG002972 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17788127-17788626 Theobroma cacao
Thecc1EG002972 0.5kb downstream 0.5kb downstream 7603 true scaffold_1: 17780524-17788126 Theobroma cacao
Thecc1EG002972 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17780524-17781023 Theobroma cacao
Thecc1EG002972 1.0kb upstream 1.0kb upstream 8103 true scaffold_1: 17781024-17789126 Theobroma cacao
Thecc1EG002972 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17788127-17789126 Theobroma cacao
Thecc1EG002972 1.0kb downstream 1.0kb downstream 8103 true scaffold_1: 17780024-17788126 Theobroma cacao
Thecc1EG002972 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17780024-17781023 Theobroma cacao
Thecc1EG002972 2.0kb upstream 2.0kb upstream 9103 true scaffold_1: 17781024-17790126 Theobroma cacao
Thecc1EG002972 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17788127-17790126 Theobroma cacao
Thecc1EG002972 2.0kb downstream 2.0kb downstream 9103 true scaffold_1: 17779024-17788126 Theobroma cacao
Thecc1EG002972 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17779024-17781023 Theobroma cacao
Thecc1EG002972 5.0kb upstream 5.0kb upstream 12103 true scaffold_1: 17781024-17793126 Theobroma cacao
Thecc1EG002972 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17788127-17793126 Theobroma cacao
Thecc1EG002972 5.0kb downstream 5.0kb downstream 12103 true scaffold_1: 17776024-17788126 Theobroma cacao
Thecc1EG002972 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17776024-17781023 Theobroma cacao
Thecc1EG002972 10.0kb upstream 10.0kb upstream 17103 true scaffold_1: 17781024-17798126 Theobroma cacao
Thecc1EG002972 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17788127-17798126 Theobroma cacao
Thecc1EG002972 10.0kb downstream 10.0kb downstream 17103 true scaffold_1: 17771024-17788126 Theobroma cacao
Thecc1EG002972 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17771024-17781023 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837592 5264 Brassicales-Malvales View MSA
124337220 5266 SBM View MSA
124242986 5268 Malvidae View MSA
124065521 5270 Rosid View MSA
123739114 5271 Pentapetalae View MSA
122786546 5272 Eudicot View MSA
122046788 5273 Angiosperm View MSA
121346077 5274 Embryophyte View MSA
123380322 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain