Gene : Thecc1EG003433 T. cacao v1.1

Defline:  (1 of 1) K03596 - GTP-binding protein LepA (lepA) Genomic Order:  2355
Name:  ? Thecc1EG003433 Secondary Identifier:  ? PAC:27433446

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003433 0.5kb upstream 0.5kb upstream 54340 true scaffold_1: 22860832-22915171 Theobroma cacao
Thecc1EG003433 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 22860832-22861331 Theobroma cacao
Thecc1EG003433 0.5kb downstream 0.5kb downstream 54340 true scaffold_1: 22861332-22915671 Theobroma cacao
Thecc1EG003433 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 22915172-22915671 Theobroma cacao
Thecc1EG003433 1.0kb upstream 1.0kb upstream 54840 true scaffold_1: 22860332-22915171 Theobroma cacao
Thecc1EG003433 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 22860332-22861331 Theobroma cacao
Thecc1EG003433 1.0kb downstream 1.0kb downstream 54840 true scaffold_1: 22861332-22916171 Theobroma cacao
Thecc1EG003433 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 22915172-22916171 Theobroma cacao
Thecc1EG003433 2.0kb upstream 2.0kb upstream 55840 true scaffold_1: 22859332-22915171 Theobroma cacao
Thecc1EG003433 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 22859332-22861331 Theobroma cacao
Thecc1EG003433 2.0kb downstream 2.0kb downstream 55840 true scaffold_1: 22861332-22917171 Theobroma cacao
Thecc1EG003433 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 22915172-22917171 Theobroma cacao
Thecc1EG003433 5.0kb upstream 5.0kb upstream 58840 true scaffold_1: 22856332-22915171 Theobroma cacao
Thecc1EG003433 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 22856332-22861331 Theobroma cacao
Thecc1EG003433 5.0kb downstream 5.0kb downstream 58840 true scaffold_1: 22861332-22920171 Theobroma cacao
Thecc1EG003433 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 22915172-22920171 Theobroma cacao
Thecc1EG003433 10.0kb upstream 10.0kb upstream 63840 true scaffold_1: 22851332-22915171 Theobroma cacao
Thecc1EG003433 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 22851332-22861331 Theobroma cacao
Thecc1EG003433 10.0kb downstream 10.0kb downstream 63840 true scaffold_1: 22861332-22925171 Theobroma cacao
Thecc1EG003433 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 22915172-22925171 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835701 5264 Brassicales-Malvales View MSA
124344533 5266 SBM View MSA
124239285 5268 Malvidae View MSA
124062257 5270 Rosid View MSA
123740224 5271 Pentapetalae View MSA
122792991 5272 Eudicot View MSA
122047519 5273 Angiosperm View MSA
121346880 5274 Embryophyte View MSA
123428320 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain