Gene : Thecc1EG003948 T. cacao v1.1

Defline:  Uncharacterized protein (52%P) Genomic Order:  2507
Name:  ? Thecc1EG003948 Secondary Identifier:  ? PAC:27434470

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003948 0.5kb upstream 0.5kb upstream 3723 true scaffold_1: 28091710-28095432 Theobroma cacao
Thecc1EG003948 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 28094933-28095432 Theobroma cacao
Thecc1EG003948 0.5kb downstream 0.5kb downstream 3723 true scaffold_1: 28091210-28094932 Theobroma cacao
Thecc1EG003948 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 28091210-28091709 Theobroma cacao
Thecc1EG003948 1.0kb upstream 1.0kb upstream 4223 true scaffold_1: 28091710-28095932 Theobroma cacao
Thecc1EG003948 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 28094933-28095932 Theobroma cacao
Thecc1EG003948 1.0kb downstream 1.0kb downstream 4223 true scaffold_1: 28090710-28094932 Theobroma cacao
Thecc1EG003948 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 28090710-28091709 Theobroma cacao
Thecc1EG003948 2.0kb upstream 2.0kb upstream 5223 true scaffold_1: 28091710-28096932 Theobroma cacao
Thecc1EG003948 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 28094933-28096932 Theobroma cacao
Thecc1EG003948 2.0kb downstream 2.0kb downstream 5223 true scaffold_1: 28089710-28094932 Theobroma cacao
Thecc1EG003948 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 28089710-28091709 Theobroma cacao
Thecc1EG003948 5.0kb upstream 5.0kb upstream 8223 true scaffold_1: 28091710-28099932 Theobroma cacao
Thecc1EG003948 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 28094933-28099932 Theobroma cacao
Thecc1EG003948 5.0kb downstream 5.0kb downstream 8223 true scaffold_1: 28086710-28094932 Theobroma cacao
Thecc1EG003948 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 28086710-28091709 Theobroma cacao
Thecc1EG003948 10.0kb upstream 10.0kb upstream 13223 true scaffold_1: 28091710-28104932 Theobroma cacao
Thecc1EG003948 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 28094933-28104932 Theobroma cacao
Thecc1EG003948 10.0kb downstream 10.0kb downstream 13223 true scaffold_1: 28081710-28094932 Theobroma cacao
Thecc1EG003948 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 28081710-28091709 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124237861 5268 Malvidae View MSA
123833965 5264 Brassicales-Malvales View MSA
124338178 5266 SBM View MSA
124061650 5270 Rosid View MSA
123753133 5271 Pentapetalae View MSA
122794292 5272 Eudicot View MSA
122045555 5273 Angiosperm View MSA
121349890 5274 Embryophyte View MSA
123381485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain