Gene : Thecc1EG003907 T. cacao v1.1
Defline:  (1 of 2) PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2486
Name:  ? Thecc1EG003907 Secondary Identifier:  ? PAC:27434537
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003907 0.5kb upstream 0.5kb upstream 5019 true scaffold_1: 27758397-27763415 Theobroma cacao
Thecc1EG003907 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 27762916-27763415 Theobroma cacao
Thecc1EG003907 0.5kb downstream 0.5kb downstream 5019 true scaffold_1: 27757897-27762915 Theobroma cacao
Thecc1EG003907 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 27757897-27758396 Theobroma cacao
Thecc1EG003907 1.0kb upstream 1.0kb upstream 5519 true scaffold_1: 27758397-27763915 Theobroma cacao
Thecc1EG003907 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 27762916-27763915 Theobroma cacao
Thecc1EG003907 1.0kb downstream 1.0kb downstream 5519 true scaffold_1: 27757397-27762915 Theobroma cacao
Thecc1EG003907 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 27757397-27758396 Theobroma cacao
Thecc1EG003907 2.0kb upstream 2.0kb upstream 6519 true scaffold_1: 27758397-27764915 Theobroma cacao
Thecc1EG003907 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 27762916-27764915 Theobroma cacao
Thecc1EG003907 2.0kb downstream 2.0kb downstream 6519 true scaffold_1: 27756397-27762915 Theobroma cacao
Thecc1EG003907 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 27756397-27758396 Theobroma cacao
Thecc1EG003907 5.0kb upstream 5.0kb upstream 9519 true scaffold_1: 27758397-27767915 Theobroma cacao
Thecc1EG003907 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 27762916-27767915 Theobroma cacao
Thecc1EG003907 5.0kb downstream 5.0kb downstream 9519 true scaffold_1: 27753397-27762915 Theobroma cacao
Thecc1EG003907 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 27753397-27758396 Theobroma cacao
Thecc1EG003907 10.0kb upstream 10.0kb upstream 14519 true scaffold_1: 27758397-27772915 Theobroma cacao
Thecc1EG003907 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 27762916-27772915 Theobroma cacao
Thecc1EG003907 10.0kb downstream 10.0kb downstream 14519 true scaffold_1: 27748397-27762915 Theobroma cacao
Thecc1EG003907 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 27748397-27758396 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838577 5264 Brassicales-Malvales View MSA
124349595 5266 SBM View MSA
124246914 5268 Malvidae View MSA
124072128 5270 Rosid View MSA
123746638 5271 Pentapetalae View MSA
122792580 5272 Eudicot View MSA
122047878 5273 Angiosperm View MSA
121349100 5274 Embryophyte View MSA
123426825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain