Gene : Thecc1EG004103 T. cacao v1.1
Defline:  (1 of 1) PTHR31529:SF2 - LOB DOMAIN-CONTAINING PROTEIN 17-RELATED Genomic Order:  2600
Name:  ? Thecc1EG004103 Secondary Identifier:  ? PAC:27437337
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004103 0.5kb upstream 0.5kb upstream 1653 true scaffold_1: 29210140-29211792 Theobroma cacao
Thecc1EG004103 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 29210140-29210639 Theobroma cacao
Thecc1EG004103 0.5kb downstream 0.5kb downstream 1653 true scaffold_1: 29210640-29212292 Theobroma cacao
Thecc1EG004103 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 29211793-29212292 Theobroma cacao
Thecc1EG004103 1.0kb upstream 1.0kb upstream 2153 true scaffold_1: 29209640-29211792 Theobroma cacao
Thecc1EG004103 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 29209640-29210639 Theobroma cacao
Thecc1EG004103 1.0kb downstream 1.0kb downstream 2153 true scaffold_1: 29210640-29212792 Theobroma cacao
Thecc1EG004103 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 29211793-29212792 Theobroma cacao
Thecc1EG004103 2.0kb upstream 2.0kb upstream 3153 true scaffold_1: 29208640-29211792 Theobroma cacao
Thecc1EG004103 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 29208640-29210639 Theobroma cacao
Thecc1EG004103 2.0kb downstream 2.0kb downstream 3153 true scaffold_1: 29210640-29213792 Theobroma cacao
Thecc1EG004103 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 29211793-29213792 Theobroma cacao
Thecc1EG004103 5.0kb upstream 5.0kb upstream 6153 true scaffold_1: 29205640-29211792 Theobroma cacao
Thecc1EG004103 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 29205640-29210639 Theobroma cacao
Thecc1EG004103 5.0kb downstream 5.0kb downstream 6153 true scaffold_1: 29210640-29216792 Theobroma cacao
Thecc1EG004103 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 29211793-29216792 Theobroma cacao
Thecc1EG004103 10.0kb upstream 10.0kb upstream 11153 true scaffold_1: 29200640-29211792 Theobroma cacao
Thecc1EG004103 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 29200640-29210639 Theobroma cacao
Thecc1EG004103 10.0kb downstream 10.0kb downstream 11153 true scaffold_1: 29210640-29221792 Theobroma cacao
Thecc1EG004103 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 29211793-29221792 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029797 5273 Angiosperm View MSA
123835967 5264 Brassicales-Malvales View MSA
124343312 5266 SBM View MSA
124240065 5268 Malvidae View MSA
124062010 5270 Rosid View MSA
123741408 5271 Pentapetalae View MSA
122794456 5272 Eudicot View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain