Gene : Thecc1EG004456 T. cacao v1.1
Defline:  (1 of 1) KOG3448 - Predicted snRNP core protein Genomic Order:  2831
Name:  ? Thecc1EG004456 Secondary Identifier:  ? PAC:27433885
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004456 0.5kb upstream 0.5kb upstream 8517 true scaffold_1: 31680165-31688681 Theobroma cacao
Thecc1EG004456 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 31688182-31688681 Theobroma cacao
Thecc1EG004456 0.5kb downstream 0.5kb downstream 8517 true scaffold_1: 31679665-31688181 Theobroma cacao
Thecc1EG004456 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 31679665-31680164 Theobroma cacao
Thecc1EG004456 1.0kb upstream 1.0kb upstream 9017 true scaffold_1: 31680165-31689181 Theobroma cacao
Thecc1EG004456 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 31688182-31689181 Theobroma cacao
Thecc1EG004456 1.0kb downstream 1.0kb downstream 9017 true scaffold_1: 31679165-31688181 Theobroma cacao
Thecc1EG004456 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 31679165-31680164 Theobroma cacao
Thecc1EG004456 2.0kb upstream 2.0kb upstream 10017 true scaffold_1: 31680165-31690181 Theobroma cacao
Thecc1EG004456 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 31688182-31690181 Theobroma cacao
Thecc1EG004456 2.0kb downstream 2.0kb downstream 10017 true scaffold_1: 31678165-31688181 Theobroma cacao
Thecc1EG004456 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 31678165-31680164 Theobroma cacao
Thecc1EG004456 5.0kb upstream 5.0kb upstream 13017 true scaffold_1: 31680165-31693181 Theobroma cacao
Thecc1EG004456 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 31688182-31693181 Theobroma cacao
Thecc1EG004456 5.0kb downstream 5.0kb downstream 13017 true scaffold_1: 31675165-31688181 Theobroma cacao
Thecc1EG004456 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 31675165-31680164 Theobroma cacao
Thecc1EG004456 10.0kb upstream 10.0kb upstream 18017 true scaffold_1: 31680165-31698181 Theobroma cacao
Thecc1EG004456 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 31688182-31698181 Theobroma cacao
Thecc1EG004456 10.0kb downstream 10.0kb downstream 18017 true scaffold_1: 31670165-31688181 Theobroma cacao
Thecc1EG004456 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 31670165-31680164 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
123839948 5264 Brassicales-Malvales View MSA
124347827 5266 SBM View MSA
124244421 5268 Malvidae View MSA
124064148 5270 Rosid View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain