Gene : Thecc1EG004881 T. cacao v1.1
Defline:  (1 of 1) PTHR11183//PTHR11183:SF54 - GLYCOGENIN // SUBFAMILY NOT NAMED Genomic Order:  3177
Name:  ? Thecc1EG004881 Secondary Identifier:  ? PAC:27432777
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5337 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004881 0.5kb upstream 0.5kb upstream 2526 true scaffold_1: 33922868-33925393 Theobroma cacao
Thecc1EG004881 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33922868-33923367 Theobroma cacao
Thecc1EG004881 0.5kb downstream 0.5kb downstream 2526 true scaffold_1: 33923368-33925893 Theobroma cacao
Thecc1EG004881 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33925394-33925893 Theobroma cacao
Thecc1EG004881 1.0kb upstream 1.0kb upstream 3026 true scaffold_1: 33922368-33925393 Theobroma cacao
Thecc1EG004881 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33922368-33923367 Theobroma cacao
Thecc1EG004881 1.0kb downstream 1.0kb downstream 3026 true scaffold_1: 33923368-33926393 Theobroma cacao
Thecc1EG004881 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33925394-33926393 Theobroma cacao
Thecc1EG004881 2.0kb upstream 2.0kb upstream 4026 true scaffold_1: 33921368-33925393 Theobroma cacao
Thecc1EG004881 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33921368-33923367 Theobroma cacao
Thecc1EG004881 2.0kb downstream 2.0kb downstream 4026 true scaffold_1: 33923368-33927393 Theobroma cacao
Thecc1EG004881 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33925394-33927393 Theobroma cacao
Thecc1EG004881 5.0kb upstream 5.0kb upstream 7026 true scaffold_1: 33918368-33925393 Theobroma cacao
Thecc1EG004881 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33918368-33923367 Theobroma cacao
Thecc1EG004881 5.0kb downstream 5.0kb downstream 7026 true scaffold_1: 33923368-33930393 Theobroma cacao
Thecc1EG004881 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33925394-33930393 Theobroma cacao
Thecc1EG004881 10.0kb upstream 10.0kb upstream 12026 true scaffold_1: 33913368-33925393 Theobroma cacao
Thecc1EG004881 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33913368-33923367 Theobroma cacao
Thecc1EG004881 10.0kb downstream 10.0kb downstream 12026 true scaffold_1: 33923368-33935393 Theobroma cacao
Thecc1EG004881 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33925394-33935393 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829587 5264 Brassicales-Malvales View MSA
124341086 5266 SBM View MSA
124253823 5268 Malvidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain