Gene : Thecc1EG004823 T. cacao v1.1
Defline:  (1 of 3) PF04795 - PAPA-1-like conserved region (PAPA-1) Genomic Order:  3129
Name:  ? Thecc1EG004823 Secondary Identifier:  ? PAC:27432796
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004823 0.5kb upstream 0.5kb upstream 4828 true scaffold_1: 33637356-33642183 Theobroma cacao
Thecc1EG004823 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33641684-33642183 Theobroma cacao
Thecc1EG004823 0.5kb downstream 0.5kb downstream 4828 true scaffold_1: 33636856-33641683 Theobroma cacao
Thecc1EG004823 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33636856-33637355 Theobroma cacao
Thecc1EG004823 1.0kb upstream 1.0kb upstream 5328 true scaffold_1: 33637356-33642683 Theobroma cacao
Thecc1EG004823 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33641684-33642683 Theobroma cacao
Thecc1EG004823 1.0kb downstream 1.0kb downstream 5328 true scaffold_1: 33636356-33641683 Theobroma cacao
Thecc1EG004823 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33636356-33637355 Theobroma cacao
Thecc1EG004823 2.0kb upstream 2.0kb upstream 6328 true scaffold_1: 33637356-33643683 Theobroma cacao
Thecc1EG004823 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33641684-33643683 Theobroma cacao
Thecc1EG004823 2.0kb downstream 2.0kb downstream 6328 true scaffold_1: 33635356-33641683 Theobroma cacao
Thecc1EG004823 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33635356-33637355 Theobroma cacao
Thecc1EG004823 5.0kb upstream 5.0kb upstream 9328 true scaffold_1: 33637356-33646683 Theobroma cacao
Thecc1EG004823 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33641684-33646683 Theobroma cacao
Thecc1EG004823 5.0kb downstream 5.0kb downstream 9328 true scaffold_1: 33632356-33641683 Theobroma cacao
Thecc1EG004823 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33632356-33637355 Theobroma cacao
Thecc1EG004823 10.0kb upstream 10.0kb upstream 14328 true scaffold_1: 33637356-33651683 Theobroma cacao
Thecc1EG004823 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33641684-33651683 Theobroma cacao
Thecc1EG004823 10.0kb downstream 10.0kb downstream 14328 true scaffold_1: 33627356-33641683 Theobroma cacao
Thecc1EG004823 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33627356-33637355 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041502 5273 Angiosperm View MSA
123831383 5264 Brassicales-Malvales View MSA
124336529 5266 SBM View MSA
124246611 5268 Malvidae View MSA
124071292 5270 Rosid View MSA
123742118 5271 Pentapetalae View MSA
122796664 5272 Eudicot View MSA
121348202 5274 Embryophyte View MSA
123380771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain