Gene : Thecc1EG004796 T. cacao v1.1
Defline:  (1 of 2) PTHR24423//PTHR24423:SF514 - TWO-COMPONENT SENSOR HISTIDINE KINASE // HISTIDINE KINASE CKI1 Genomic Order:  3109
Name:  ? Thecc1EG004796 Secondary Identifier:  ? PAC:27432867
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004796 0.5kb upstream 0.5kb upstream 6459 true scaffold_1: 33517799-33524257 Theobroma cacao
Thecc1EG004796 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33517799-33518298 Theobroma cacao
Thecc1EG004796 0.5kb downstream 0.5kb downstream 6459 true scaffold_1: 33518299-33524757 Theobroma cacao
Thecc1EG004796 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33524258-33524757 Theobroma cacao
Thecc1EG004796 1.0kb upstream 1.0kb upstream 6959 true scaffold_1: 33517299-33524257 Theobroma cacao
Thecc1EG004796 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33517299-33518298 Theobroma cacao
Thecc1EG004796 1.0kb downstream 1.0kb downstream 6959 true scaffold_1: 33518299-33525257 Theobroma cacao
Thecc1EG004796 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33524258-33525257 Theobroma cacao
Thecc1EG004796 2.0kb upstream 2.0kb upstream 7959 true scaffold_1: 33516299-33524257 Theobroma cacao
Thecc1EG004796 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33516299-33518298 Theobroma cacao
Thecc1EG004796 2.0kb downstream 2.0kb downstream 7959 true scaffold_1: 33518299-33526257 Theobroma cacao
Thecc1EG004796 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33524258-33526257 Theobroma cacao
Thecc1EG004796 5.0kb upstream 5.0kb upstream 10959 true scaffold_1: 33513299-33524257 Theobroma cacao
Thecc1EG004796 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33513299-33518298 Theobroma cacao
Thecc1EG004796 5.0kb downstream 5.0kb downstream 10959 true scaffold_1: 33518299-33529257 Theobroma cacao
Thecc1EG004796 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33524258-33529257 Theobroma cacao
Thecc1EG004796 10.0kb upstream 10.0kb upstream 15959 true scaffold_1: 33508299-33524257 Theobroma cacao
Thecc1EG004796 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33508299-33518298 Theobroma cacao
Thecc1EG004796 10.0kb downstream 10.0kb downstream 15959 true scaffold_1: 33518299-33534257 Theobroma cacao
Thecc1EG004796 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33524258-33534257 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828225 5264 Brassicales-Malvales View MSA
124337325 5266 SBM View MSA
124250298 5268 Malvidae View MSA
124066591 5270 Rosid View MSA
123753763 5271 Pentapetalae View MSA
122789749 5272 Eudicot View MSA
122048751 5273 Angiosperm View MSA
123429048 5275 Viridiplantae View MSA
121348111 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain