Gene : Thecc1EG005021 T. cacao v1.1
Defline:  (1 of 1) K12133 - MYB-related transcription factor LHY (LHY) Genomic Order:  3300
Name:  ? Thecc1EG005021 Secondary Identifier:  ? PAC:27431941
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005021 0.5kb upstream 0.5kb upstream 8105 true scaffold_1: 34655575-34663679 Theobroma cacao
Thecc1EG005021 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34663180-34663679 Theobroma cacao
Thecc1EG005021 0.5kb downstream 0.5kb downstream 8105 true scaffold_1: 34655075-34663179 Theobroma cacao
Thecc1EG005021 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34655075-34655574 Theobroma cacao
Thecc1EG005021 1.0kb upstream 1.0kb upstream 8605 true scaffold_1: 34655575-34664179 Theobroma cacao
Thecc1EG005021 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34663180-34664179 Theobroma cacao
Thecc1EG005021 1.0kb downstream 1.0kb downstream 8605 true scaffold_1: 34654575-34663179 Theobroma cacao
Thecc1EG005021 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34654575-34655574 Theobroma cacao
Thecc1EG005021 2.0kb upstream 2.0kb upstream 9605 true scaffold_1: 34655575-34665179 Theobroma cacao
Thecc1EG005021 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34663180-34665179 Theobroma cacao
Thecc1EG005021 2.0kb downstream 2.0kb downstream 9605 true scaffold_1: 34653575-34663179 Theobroma cacao
Thecc1EG005021 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34653575-34655574 Theobroma cacao
Thecc1EG005021 5.0kb upstream 5.0kb upstream 12605 true scaffold_1: 34655575-34668179 Theobroma cacao
Thecc1EG005021 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34663180-34668179 Theobroma cacao
Thecc1EG005021 5.0kb downstream 5.0kb downstream 12605 true scaffold_1: 34650575-34663179 Theobroma cacao
Thecc1EG005021 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34650575-34655574 Theobroma cacao
Thecc1EG005021 10.0kb upstream 10.0kb upstream 17605 true scaffold_1: 34655575-34673179 Theobroma cacao
Thecc1EG005021 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34663180-34673179 Theobroma cacao
Thecc1EG005021 10.0kb downstream 10.0kb downstream 17605 true scaffold_1: 34645575-34663179 Theobroma cacao
Thecc1EG005021 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34645575-34655574 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827456 5264 Brassicales-Malvales View MSA
124346704 5266 SBM View MSA
124237237 5268 Malvidae View MSA
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain