Gene : Thecc1EG004988 T. cacao v1.1
Defline:  (1 of 1) PTHR31969//PTHR31969:SF9 - FAMILY NOT NAMED // GEM-LIKE PROTEIN 2 Genomic Order:  3269
Name:  ? Thecc1EG004988 Secondary Identifier:  ? PAC:27437283
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004988 0.5kb upstream 0.5kb upstream 2523 true scaffold_1: 34501800-34504322 Theobroma cacao
Thecc1EG004988 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34503823-34504322 Theobroma cacao
Thecc1EG004988 0.5kb downstream 0.5kb downstream 2523 true scaffold_1: 34501300-34503822 Theobroma cacao
Thecc1EG004988 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34501300-34501799 Theobroma cacao
Thecc1EG004988 1.0kb upstream 1.0kb upstream 3023 true scaffold_1: 34501800-34504822 Theobroma cacao
Thecc1EG004988 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34503823-34504822 Theobroma cacao
Thecc1EG004988 1.0kb downstream 1.0kb downstream 3023 true scaffold_1: 34500800-34503822 Theobroma cacao
Thecc1EG004988 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34500800-34501799 Theobroma cacao
Thecc1EG004988 2.0kb upstream 2.0kb upstream 4023 true scaffold_1: 34501800-34505822 Theobroma cacao
Thecc1EG004988 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34503823-34505822 Theobroma cacao
Thecc1EG004988 2.0kb downstream 2.0kb downstream 4023 true scaffold_1: 34499800-34503822 Theobroma cacao
Thecc1EG004988 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34499800-34501799 Theobroma cacao
Thecc1EG004988 5.0kb upstream 5.0kb upstream 7023 true scaffold_1: 34501800-34508822 Theobroma cacao
Thecc1EG004988 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34503823-34508822 Theobroma cacao
Thecc1EG004988 5.0kb downstream 5.0kb downstream 7023 true scaffold_1: 34496800-34503822 Theobroma cacao
Thecc1EG004988 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34496800-34501799 Theobroma cacao
Thecc1EG004988 10.0kb upstream 10.0kb upstream 12023 true scaffold_1: 34501800-34513822 Theobroma cacao
Thecc1EG004988 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34503823-34513822 Theobroma cacao
Thecc1EG004988 10.0kb downstream 10.0kb downstream 12023 true scaffold_1: 34491800-34503822 Theobroma cacao
Thecc1EG004988 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34491800-34501799 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836734 5264 Brassicales-Malvales View MSA
124346748 5266 SBM View MSA
124250803 5268 Malvidae View MSA
124072428 5270 Rosid View MSA
123752568 5271 Pentapetalae View MSA
122797412 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain