Gene : Thecc1EG004945 T. cacao v1.1
Defline:  (1 of 2) K01881 - prolyl-tRNA synthetase (PARS, proS) Genomic Order:  3232
Name:  ? Thecc1EG004945 Secondary Identifier:  ? PAC:27432358
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5188 Theobroma cacao pathologic  
Tcacao PWY-5918 Theobroma cacao pathologic  
Tcacao TRNA-CHARGING-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004945 0.5kb upstream 0.5kb upstream 6492 true scaffold_1: 34260632-34267123 Theobroma cacao
Thecc1EG004945 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34260632-34261131 Theobroma cacao
Thecc1EG004945 0.5kb downstream 0.5kb downstream 6492 true scaffold_1: 34261132-34267623 Theobroma cacao
Thecc1EG004945 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34267124-34267623 Theobroma cacao
Thecc1EG004945 1.0kb upstream 1.0kb upstream 6992 true scaffold_1: 34260132-34267123 Theobroma cacao
Thecc1EG004945 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34260132-34261131 Theobroma cacao
Thecc1EG004945 1.0kb downstream 1.0kb downstream 6992 true scaffold_1: 34261132-34268123 Theobroma cacao
Thecc1EG004945 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34267124-34268123 Theobroma cacao
Thecc1EG004945 2.0kb upstream 2.0kb upstream 7992 true scaffold_1: 34259132-34267123 Theobroma cacao
Thecc1EG004945 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34259132-34261131 Theobroma cacao
Thecc1EG004945 2.0kb downstream 2.0kb downstream 7992 true scaffold_1: 34261132-34269123 Theobroma cacao
Thecc1EG004945 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34267124-34269123 Theobroma cacao
Thecc1EG004945 5.0kb upstream 5.0kb upstream 10992 true scaffold_1: 34256132-34267123 Theobroma cacao
Thecc1EG004945 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34256132-34261131 Theobroma cacao
Thecc1EG004945 5.0kb downstream 5.0kb downstream 10992 true scaffold_1: 34261132-34272123 Theobroma cacao
Thecc1EG004945 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34267124-34272123 Theobroma cacao
Thecc1EG004945 10.0kb upstream 10.0kb upstream 15992 true scaffold_1: 34251132-34267123 Theobroma cacao
Thecc1EG004945 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34251132-34261131 Theobroma cacao
Thecc1EG004945 10.0kb downstream 10.0kb downstream 15992 true scaffold_1: 34261132-34277123 Theobroma cacao
Thecc1EG004945 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34267124-34277123 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831041 5264 Brassicales-Malvales View MSA
124348511 5266 SBM View MSA
124247467 5268 Malvidae View MSA
124064223 5270 Rosid View MSA
123739091 5271 Pentapetalae View MSA
122787738 5272 Eudicot View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain