Gene : Thecc1EG004940 T. cacao v1.1
Defline:  (1 of 1) PTHR13495//PTHR13495:SF0 - NEFA-INTERACTING NUCLEAR PROTEIN NIP30 // PROTEIN FAM192A Genomic Order:  3228
Name:  ? Thecc1EG004940 Secondary Identifier:  ? PAC:27433938
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004940 0.5kb upstream 0.5kb upstream 3242 true scaffold_1: 34243214-34246455 Theobroma cacao
Thecc1EG004940 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34245956-34246455 Theobroma cacao
Thecc1EG004940 0.5kb downstream 0.5kb downstream 3242 true scaffold_1: 34242714-34245955 Theobroma cacao
Thecc1EG004940 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34242714-34243213 Theobroma cacao
Thecc1EG004940 1.0kb upstream 1.0kb upstream 3742 true scaffold_1: 34243214-34246955 Theobroma cacao
Thecc1EG004940 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34245956-34246955 Theobroma cacao
Thecc1EG004940 1.0kb downstream 1.0kb downstream 3742 true scaffold_1: 34242214-34245955 Theobroma cacao
Thecc1EG004940 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34242214-34243213 Theobroma cacao
Thecc1EG004940 2.0kb upstream 2.0kb upstream 4742 true scaffold_1: 34243214-34247955 Theobroma cacao
Thecc1EG004940 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34245956-34247955 Theobroma cacao
Thecc1EG004940 2.0kb downstream 2.0kb downstream 4742 true scaffold_1: 34241214-34245955 Theobroma cacao
Thecc1EG004940 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34241214-34243213 Theobroma cacao
Thecc1EG004940 5.0kb upstream 5.0kb upstream 7742 true scaffold_1: 34243214-34250955 Theobroma cacao
Thecc1EG004940 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34245956-34250955 Theobroma cacao
Thecc1EG004940 5.0kb downstream 5.0kb downstream 7742 true scaffold_1: 34238214-34245955 Theobroma cacao
Thecc1EG004940 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34238214-34243213 Theobroma cacao
Thecc1EG004940 10.0kb upstream 10.0kb upstream 12742 true scaffold_1: 34243214-34255955 Theobroma cacao
Thecc1EG004940 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34245956-34255955 Theobroma cacao
Thecc1EG004940 10.0kb downstream 10.0kb downstream 12742 true scaffold_1: 34233214-34245955 Theobroma cacao
Thecc1EG004940 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34233214-34243213 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830029 5264 Brassicales-Malvales View MSA
124343062 5266 SBM View MSA
124241413 5268 Malvidae View MSA
124063271 5270 Rosid View MSA
123737480 5271 Pentapetalae View MSA
122787094 5272 Eudicot View MSA
122047119 5273 Angiosperm View MSA
121346332 5274 Embryophyte View MSA
123425229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain