Gene : Thecc1EG005180 T. cacao v1.1
Defline:  (1 of 3) PTHR10366//PTHR10366:SF458 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  3429
Name:  ? Thecc1EG005180 Secondary Identifier:  ? PAC:27437105
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY1F-823 Theobroma cacao pathologic  
Tcacao PWY-5152 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005180 0.5kb upstream 0.5kb upstream 3645 true scaffold_1: 35468415-35472059 Theobroma cacao
Thecc1EG005180 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35471560-35472059 Theobroma cacao
Thecc1EG005180 0.5kb downstream 0.5kb downstream 3645 true scaffold_1: 35467915-35471559 Theobroma cacao
Thecc1EG005180 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35467915-35468414 Theobroma cacao
Thecc1EG005180 1.0kb upstream 1.0kb upstream 4145 true scaffold_1: 35468415-35472559 Theobroma cacao
Thecc1EG005180 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35471560-35472559 Theobroma cacao
Thecc1EG005180 1.0kb downstream 1.0kb downstream 4145 true scaffold_1: 35467415-35471559 Theobroma cacao
Thecc1EG005180 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35467415-35468414 Theobroma cacao
Thecc1EG005180 2.0kb upstream 2.0kb upstream 5145 true scaffold_1: 35468415-35473559 Theobroma cacao
Thecc1EG005180 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35471560-35473559 Theobroma cacao
Thecc1EG005180 2.0kb downstream 2.0kb downstream 5145 true scaffold_1: 35466415-35471559 Theobroma cacao
Thecc1EG005180 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35466415-35468414 Theobroma cacao
Thecc1EG005180 5.0kb upstream 5.0kb upstream 8145 true scaffold_1: 35468415-35476559 Theobroma cacao
Thecc1EG005180 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35471560-35476559 Theobroma cacao
Thecc1EG005180 5.0kb downstream 5.0kb downstream 8145 true scaffold_1: 35463415-35471559 Theobroma cacao
Thecc1EG005180 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35463415-35468414 Theobroma cacao
Thecc1EG005180 10.0kb upstream 10.0kb upstream 13145 true scaffold_1: 35468415-35481559 Theobroma cacao
Thecc1EG005180 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35471560-35481559 Theobroma cacao
Thecc1EG005180 10.0kb downstream 10.0kb downstream 13145 true scaffold_1: 35458415-35471559 Theobroma cacao
Thecc1EG005180 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35458415-35468414 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824482 5264 Brassicales-Malvales View MSA
124351549 5266 SBM View MSA
124252982 5268 Malvidae View MSA
124071973 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain