Gene : Thecc1EG005171 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  3422
Name:  ? Thecc1EG005171 Secondary Identifier:  ? PAC:27436018
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005171 0.5kb upstream 0.5kb upstream 4210 true scaffold_1: 35425564-35429773 Theobroma cacao
Thecc1EG005171 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35429274-35429773 Theobroma cacao
Thecc1EG005171 0.5kb downstream 0.5kb downstream 4210 true scaffold_1: 35425064-35429273 Theobroma cacao
Thecc1EG005171 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35425064-35425563 Theobroma cacao
Thecc1EG005171 1.0kb upstream 1.0kb upstream 4710 true scaffold_1: 35425564-35430273 Theobroma cacao
Thecc1EG005171 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35429274-35430273 Theobroma cacao
Thecc1EG005171 1.0kb downstream 1.0kb downstream 4710 true scaffold_1: 35424564-35429273 Theobroma cacao
Thecc1EG005171 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35424564-35425563 Theobroma cacao
Thecc1EG005171 2.0kb upstream 2.0kb upstream 5710 true scaffold_1: 35425564-35431273 Theobroma cacao
Thecc1EG005171 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35429274-35431273 Theobroma cacao
Thecc1EG005171 2.0kb downstream 2.0kb downstream 5710 true scaffold_1: 35423564-35429273 Theobroma cacao
Thecc1EG005171 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35423564-35425563 Theobroma cacao
Thecc1EG005171 5.0kb upstream 5.0kb upstream 8710 true scaffold_1: 35425564-35434273 Theobroma cacao
Thecc1EG005171 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35429274-35434273 Theobroma cacao
Thecc1EG005171 5.0kb downstream 5.0kb downstream 8710 true scaffold_1: 35420564-35429273 Theobroma cacao
Thecc1EG005171 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35420564-35425563 Theobroma cacao
Thecc1EG005171 10.0kb upstream 10.0kb upstream 13710 true scaffold_1: 35425564-35439273 Theobroma cacao
Thecc1EG005171 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35429274-35439273 Theobroma cacao
Thecc1EG005171 10.0kb downstream 10.0kb downstream 13710 true scaffold_1: 35415564-35429273 Theobroma cacao
Thecc1EG005171 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35415564-35425563 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836925 5264 Brassicales-Malvales View MSA
124322225 5266 SBM View MSA
124252627 5268 Malvidae View MSA
124064804 5270 Rosid View MSA
123740477 5271 Pentapetalae View MSA
122791642 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain