Gene : Thecc1EG005314 T. cacao v1.1

Defline:  (1 of 1) PTHR24296//PTHR24296:SF9 - FAMILY NOT NAMED // CYTOCHROME P450 86A2-RELATED Genomic Order:  3549
Name:  ? Thecc1EG005314 Secondary Identifier:  ? PAC:27436403

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005314 0.5kb upstream 0.5kb upstream 3167 true scaffold_1: 36073698-36076864 Theobroma cacao
Thecc1EG005314 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36073698-36074197 Theobroma cacao
Thecc1EG005314 0.5kb downstream 0.5kb downstream 3167 true scaffold_1: 36074198-36077364 Theobroma cacao
Thecc1EG005314 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36076865-36077364 Theobroma cacao
Thecc1EG005314 1.0kb upstream 1.0kb upstream 3667 true scaffold_1: 36073198-36076864 Theobroma cacao
Thecc1EG005314 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36073198-36074197 Theobroma cacao
Thecc1EG005314 1.0kb downstream 1.0kb downstream 3667 true scaffold_1: 36074198-36077864 Theobroma cacao
Thecc1EG005314 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36076865-36077864 Theobroma cacao
Thecc1EG005314 2.0kb upstream 2.0kb upstream 4667 true scaffold_1: 36072198-36076864 Theobroma cacao
Thecc1EG005314 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36072198-36074197 Theobroma cacao
Thecc1EG005314 2.0kb downstream 2.0kb downstream 4667 true scaffold_1: 36074198-36078864 Theobroma cacao
Thecc1EG005314 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36076865-36078864 Theobroma cacao
Thecc1EG005314 5.0kb upstream 5.0kb upstream 7667 true scaffold_1: 36069198-36076864 Theobroma cacao
Thecc1EG005314 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36069198-36074197 Theobroma cacao
Thecc1EG005314 5.0kb downstream 5.0kb downstream 7667 true scaffold_1: 36074198-36081864 Theobroma cacao
Thecc1EG005314 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36076865-36081864 Theobroma cacao
Thecc1EG005314 10.0kb upstream 10.0kb upstream 12667 true scaffold_1: 36064198-36076864 Theobroma cacao
Thecc1EG005314 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36064198-36074197 Theobroma cacao
Thecc1EG005314 10.0kb downstream 10.0kb downstream 12667 true scaffold_1: 36074198-36086864 Theobroma cacao
Thecc1EG005314 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36076865-36086864 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841149 5264 Brassicales-Malvales View MSA
124348509 5266 SBM View MSA
124244859 5268 Malvidae View MSA
124071082 5270 Rosid View MSA
123742242 5271 Pentapetalae View MSA
122792854 5272 Eudicot View MSA
122045903 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121351241 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain