Gene : Thecc1EG005310 T. cacao v1.1
Defline:  Uncharacterized protein (84%P) Genomic Order:  3546
Name:  ? Thecc1EG005310 Secondary Identifier:  ? PAC:27432111
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005310 0.5kb upstream 0.5kb upstream 3647 true scaffold_1: 36057781-36061427 Theobroma cacao
Thecc1EG005310 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36060928-36061427 Theobroma cacao
Thecc1EG005310 0.5kb downstream 0.5kb downstream 3647 true scaffold_1: 36057281-36060927 Theobroma cacao
Thecc1EG005310 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36057281-36057780 Theobroma cacao
Thecc1EG005310 1.0kb upstream 1.0kb upstream 4147 true scaffold_1: 36057781-36061927 Theobroma cacao
Thecc1EG005310 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36060928-36061927 Theobroma cacao
Thecc1EG005310 1.0kb downstream 1.0kb downstream 4147 true scaffold_1: 36056781-36060927 Theobroma cacao
Thecc1EG005310 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36056781-36057780 Theobroma cacao
Thecc1EG005310 2.0kb upstream 2.0kb upstream 5147 true scaffold_1: 36057781-36062927 Theobroma cacao
Thecc1EG005310 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36060928-36062927 Theobroma cacao
Thecc1EG005310 2.0kb downstream 2.0kb downstream 5147 true scaffold_1: 36055781-36060927 Theobroma cacao
Thecc1EG005310 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36055781-36057780 Theobroma cacao
Thecc1EG005310 5.0kb upstream 5.0kb upstream 8147 true scaffold_1: 36057781-36065927 Theobroma cacao
Thecc1EG005310 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36060928-36065927 Theobroma cacao
Thecc1EG005310 5.0kb downstream 5.0kb downstream 8147 true scaffold_1: 36052781-36060927 Theobroma cacao
Thecc1EG005310 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36052781-36057780 Theobroma cacao
Thecc1EG005310 10.0kb upstream 10.0kb upstream 13147 true scaffold_1: 36057781-36070927 Theobroma cacao
Thecc1EG005310 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36060928-36070927 Theobroma cacao
Thecc1EG005310 10.0kb downstream 10.0kb downstream 13147 true scaffold_1: 36047781-36060927 Theobroma cacao
Thecc1EG005310 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36047781-36057780 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830639 5264 Brassicales-Malvales View MSA
124342747 5266 SBM View MSA
124239578 5268 Malvidae View MSA
124067075 5270 Rosid View MSA
123737373 5271 Pentapetalae View MSA
122786462 5272 Eudicot View MSA
122042611 5273 Angiosperm View MSA
123429170 5275 Viridiplantae View MSA
121346689 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain