Gene : Thecc1EG005303 T. cacao v1.1
Defline:  (1 of 1) PTHR11206//PTHR11206:SF109 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  3539
Name:  ? Thecc1EG005303 Secondary Identifier:  ? PAC:27432947
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005303 0.5kb upstream 0.5kb upstream 3511 true scaffold_1: 36006354-36009864 Theobroma cacao
Thecc1EG005303 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36006354-36006853 Theobroma cacao
Thecc1EG005303 0.5kb downstream 0.5kb downstream 3511 true scaffold_1: 36006854-36010364 Theobroma cacao
Thecc1EG005303 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36009865-36010364 Theobroma cacao
Thecc1EG005303 1.0kb upstream 1.0kb upstream 4011 true scaffold_1: 36005854-36009864 Theobroma cacao
Thecc1EG005303 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36005854-36006853 Theobroma cacao
Thecc1EG005303 1.0kb downstream 1.0kb downstream 4011 true scaffold_1: 36006854-36010864 Theobroma cacao
Thecc1EG005303 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36009865-36010864 Theobroma cacao
Thecc1EG005303 2.0kb upstream 2.0kb upstream 5011 true scaffold_1: 36004854-36009864 Theobroma cacao
Thecc1EG005303 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36004854-36006853 Theobroma cacao
Thecc1EG005303 2.0kb downstream 2.0kb downstream 5011 true scaffold_1: 36006854-36011864 Theobroma cacao
Thecc1EG005303 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36009865-36011864 Theobroma cacao
Thecc1EG005303 5.0kb upstream 5.0kb upstream 8011 true scaffold_1: 36001854-36009864 Theobroma cacao
Thecc1EG005303 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36001854-36006853 Theobroma cacao
Thecc1EG005303 5.0kb downstream 5.0kb downstream 8011 true scaffold_1: 36006854-36014864 Theobroma cacao
Thecc1EG005303 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36009865-36014864 Theobroma cacao
Thecc1EG005303 10.0kb upstream 10.0kb upstream 13011 true scaffold_1: 35996854-36009864 Theobroma cacao
Thecc1EG005303 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35996854-36006853 Theobroma cacao
Thecc1EG005303 10.0kb downstream 10.0kb downstream 13011 true scaffold_1: 36006854-36019864 Theobroma cacao
Thecc1EG005303 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36009865-36019864 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829666 5264 Brassicales-Malvales View MSA
124321619 5266 SBM View MSA
124246128 5268 Malvidae View MSA
124074534 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain