Gene : Thecc1EG005234 T. cacao v1.1
Defline:  (1 of 2) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  3476
Name:  ? Thecc1EG005234 Secondary Identifier:  ? PAC:27433611
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7601 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005234 0.5kb upstream 0.5kb upstream 3612 true scaffold_1: 35703036-35706647 Theobroma cacao
Thecc1EG005234 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35706148-35706647 Theobroma cacao
Thecc1EG005234 0.5kb downstream 0.5kb downstream 3612 true scaffold_1: 35702536-35706147 Theobroma cacao
Thecc1EG005234 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35702536-35703035 Theobroma cacao
Thecc1EG005234 1.0kb upstream 1.0kb upstream 4112 true scaffold_1: 35703036-35707147 Theobroma cacao
Thecc1EG005234 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35706148-35707147 Theobroma cacao
Thecc1EG005234 1.0kb downstream 1.0kb downstream 4112 true scaffold_1: 35702036-35706147 Theobroma cacao
Thecc1EG005234 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35702036-35703035 Theobroma cacao
Thecc1EG005234 2.0kb upstream 2.0kb upstream 5112 true scaffold_1: 35703036-35708147 Theobroma cacao
Thecc1EG005234 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35706148-35708147 Theobroma cacao
Thecc1EG005234 2.0kb downstream 2.0kb downstream 5112 true scaffold_1: 35701036-35706147 Theobroma cacao
Thecc1EG005234 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35701036-35703035 Theobroma cacao
Thecc1EG005234 5.0kb upstream 5.0kb upstream 8112 true scaffold_1: 35703036-35711147 Theobroma cacao
Thecc1EG005234 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35706148-35711147 Theobroma cacao
Thecc1EG005234 5.0kb downstream 5.0kb downstream 8112 true scaffold_1: 35698036-35706147 Theobroma cacao
Thecc1EG005234 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35698036-35703035 Theobroma cacao
Thecc1EG005234 10.0kb upstream 10.0kb upstream 13112 true scaffold_1: 35703036-35716147 Theobroma cacao
Thecc1EG005234 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35706148-35716147 Theobroma cacao
Thecc1EG005234 10.0kb downstream 10.0kb downstream 13112 true scaffold_1: 35693036-35706147 Theobroma cacao
Thecc1EG005234 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35693036-35703035 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
123840551 5264 Brassicales-Malvales View MSA
124345527 5266 SBM View MSA
124238408 5268 Malvidae View MSA
124071375 5270 Rosid View MSA
123743417 5271 Pentapetalae View MSA
122792306 5272 Eudicot View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain