Gene : Thecc1EG005214 T. cacao v1.1

Defline:  (1 of 5) PF06697 - Protein of unknown function (DUF1191) (DUF1191) Genomic Order:  3459
Name:  ? Thecc1EG005214 Secondary Identifier:  ? PAC:27433311

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005214 0.5kb upstream 0.5kb upstream 1732 true scaffold_1: 35615990-35617721 Theobroma cacao
Thecc1EG005214 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35617222-35617721 Theobroma cacao
Thecc1EG005214 0.5kb downstream 0.5kb downstream 1732 true scaffold_1: 35615490-35617221 Theobroma cacao
Thecc1EG005214 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35615490-35615989 Theobroma cacao
Thecc1EG005214 1.0kb upstream 1.0kb upstream 2232 true scaffold_1: 35615990-35618221 Theobroma cacao
Thecc1EG005214 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35617222-35618221 Theobroma cacao
Thecc1EG005214 1.0kb downstream 1.0kb downstream 2232 true scaffold_1: 35614990-35617221 Theobroma cacao
Thecc1EG005214 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35614990-35615989 Theobroma cacao
Thecc1EG005214 2.0kb upstream 2.0kb upstream 3232 true scaffold_1: 35615990-35619221 Theobroma cacao
Thecc1EG005214 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35617222-35619221 Theobroma cacao
Thecc1EG005214 2.0kb downstream 2.0kb downstream 3232 true scaffold_1: 35613990-35617221 Theobroma cacao
Thecc1EG005214 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35613990-35615989 Theobroma cacao
Thecc1EG005214 5.0kb upstream 5.0kb upstream 6232 true scaffold_1: 35615990-35622221 Theobroma cacao
Thecc1EG005214 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35617222-35622221 Theobroma cacao
Thecc1EG005214 5.0kb downstream 5.0kb downstream 6232 true scaffold_1: 35610990-35617221 Theobroma cacao
Thecc1EG005214 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35610990-35615989 Theobroma cacao
Thecc1EG005214 10.0kb upstream 10.0kb upstream 11232 true scaffold_1: 35615990-35627221 Theobroma cacao
Thecc1EG005214 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35617222-35627221 Theobroma cacao
Thecc1EG005214 10.0kb downstream 10.0kb downstream 11232 true scaffold_1: 35605990-35617221 Theobroma cacao
Thecc1EG005214 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35605990-35615989 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041468 5273 Angiosperm View MSA
123834015 5264 Brassicales-Malvales View MSA
124337307 5266 SBM View MSA
124245614 5268 Malvidae View MSA
124062142 5270 Rosid View MSA
123747246 5271 Pentapetalae View MSA
122795856 5272 Eudicot View MSA
121351350 5274 Embryophyte View MSA
123382132 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain