Gene : Thecc1EG005537 T. cacao v1.1

Defline:  (1 of 6) PF04859 - Plant protein of unknown function (DUF641) (DUF641) Genomic Order:  3750
Name:  ? Thecc1EG005537 Secondary Identifier:  ? PAC:27434487

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005537 0.5kb upstream 0.5kb upstream 4372 true scaffold_1: 37117486-37121857 Theobroma cacao
Thecc1EG005537 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37117486-37117985 Theobroma cacao
Thecc1EG005537 0.5kb downstream 0.5kb downstream 4372 true scaffold_1: 37117986-37122357 Theobroma cacao
Thecc1EG005537 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37121858-37122357 Theobroma cacao
Thecc1EG005537 1.0kb upstream 1.0kb upstream 4872 true scaffold_1: 37116986-37121857 Theobroma cacao
Thecc1EG005537 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37116986-37117985 Theobroma cacao
Thecc1EG005537 1.0kb downstream 1.0kb downstream 4872 true scaffold_1: 37117986-37122857 Theobroma cacao
Thecc1EG005537 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37121858-37122857 Theobroma cacao
Thecc1EG005537 2.0kb upstream 2.0kb upstream 5872 true scaffold_1: 37115986-37121857 Theobroma cacao
Thecc1EG005537 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37115986-37117985 Theobroma cacao
Thecc1EG005537 2.0kb downstream 2.0kb downstream 5872 true scaffold_1: 37117986-37123857 Theobroma cacao
Thecc1EG005537 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37121858-37123857 Theobroma cacao
Thecc1EG005537 5.0kb upstream 5.0kb upstream 8872 true scaffold_1: 37112986-37121857 Theobroma cacao
Thecc1EG005537 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37112986-37117985 Theobroma cacao
Thecc1EG005537 5.0kb downstream 5.0kb downstream 8872 true scaffold_1: 37117986-37126857 Theobroma cacao
Thecc1EG005537 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37121858-37126857 Theobroma cacao
Thecc1EG005537 10.0kb upstream 10.0kb upstream 13872 true scaffold_1: 37107986-37121857 Theobroma cacao
Thecc1EG005537 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37107986-37117985 Theobroma cacao
Thecc1EG005537 10.0kb downstream 10.0kb downstream 13872 true scaffold_1: 37117986-37131857 Theobroma cacao
Thecc1EG005537 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37121858-37131857 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041109 5273 Angiosperm View MSA
123830457 5264 Brassicales-Malvales View MSA
124338191 5266 SBM View MSA
124240095 5268 Malvidae View MSA
124050308 5270 Rosid View MSA
123737352 5271 Pentapetalae View MSA
122796738 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain