Gene : Thecc1EG005533 T. cacao v1.1
Defline:  (1 of 1) 2.2.1.1//2.2.1.2 - Transketolase / Glycoaldehyde transferase // Transaldolase / Glycerone transferase Genomic Order:  3746
Name:  ? Thecc1EG005533 Secondary Identifier:  ? PAC:27431325
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CALVIN-PWY Theobroma cacao pathologic  
Tcacao NONOXIPENT-PWY Theobroma cacao pathologic  
Tcacao PENTOSE-P-PWY Theobroma cacao pathologic  
Tcacao PHOTOALL-PWY Theobroma cacao pathologic  
Tcacao PWY-5723 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005533 0.5kb upstream 0.5kb upstream 4605 true scaffold_1: 37101027-37105631 Theobroma cacao
Thecc1EG005533 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37105132-37105631 Theobroma cacao
Thecc1EG005533 0.5kb downstream 0.5kb downstream 4605 true scaffold_1: 37100527-37105131 Theobroma cacao
Thecc1EG005533 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37100527-37101026 Theobroma cacao
Thecc1EG005533 1.0kb upstream 1.0kb upstream 5105 true scaffold_1: 37101027-37106131 Theobroma cacao
Thecc1EG005533 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37105132-37106131 Theobroma cacao
Thecc1EG005533 1.0kb downstream 1.0kb downstream 5105 true scaffold_1: 37100027-37105131 Theobroma cacao
Thecc1EG005533 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37100027-37101026 Theobroma cacao
Thecc1EG005533 2.0kb upstream 2.0kb upstream 6105 true scaffold_1: 37101027-37107131 Theobroma cacao
Thecc1EG005533 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37105132-37107131 Theobroma cacao
Thecc1EG005533 2.0kb downstream 2.0kb downstream 6105 true scaffold_1: 37099027-37105131 Theobroma cacao
Thecc1EG005533 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37099027-37101026 Theobroma cacao
Thecc1EG005533 5.0kb upstream 5.0kb upstream 9105 true scaffold_1: 37101027-37110131 Theobroma cacao
Thecc1EG005533 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37105132-37110131 Theobroma cacao
Thecc1EG005533 5.0kb downstream 5.0kb downstream 9105 true scaffold_1: 37096027-37105131 Theobroma cacao
Thecc1EG005533 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37096027-37101026 Theobroma cacao
Thecc1EG005533 10.0kb upstream 10.0kb upstream 14105 true scaffold_1: 37101027-37115131 Theobroma cacao
Thecc1EG005533 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37105132-37115131 Theobroma cacao
Thecc1EG005533 10.0kb downstream 10.0kb downstream 14105 true scaffold_1: 37091027-37105131 Theobroma cacao
Thecc1EG005533 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37091027-37101026 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838972 5264 Brassicales-Malvales View MSA
124338518 5266 SBM View MSA
124242357 5268 Malvidae View MSA
124064977 5270 Rosid View MSA
123741287 5271 Pentapetalae View MSA
122787703 5272 Eudicot View MSA
122048752 5273 Angiosperm View MSA
121350420 5274 Embryophyte View MSA
123423818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain