Gene : Thecc1EG005509 T. cacao v1.1
Defline:  (1 of 1) K10885 - ATP-dependent DNA helicase 2 subunit 2 (XRCC5, KU80, G22P2) Genomic Order:  3723
Name:  ? Thecc1EG005509 Secondary Identifier:  ? PAC:27431345
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005509 0.5kb upstream 0.5kb upstream 7587 true scaffold_1: 36994308-37001894 Theobroma cacao
Thecc1EG005509 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36994308-36994807 Theobroma cacao
Thecc1EG005509 0.5kb downstream 0.5kb downstream 7587 true scaffold_1: 36994808-37002394 Theobroma cacao
Thecc1EG005509 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37001895-37002394 Theobroma cacao
Thecc1EG005509 1.0kb upstream 1.0kb upstream 8087 true scaffold_1: 36993808-37001894 Theobroma cacao
Thecc1EG005509 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36993808-36994807 Theobroma cacao
Thecc1EG005509 1.0kb downstream 1.0kb downstream 8087 true scaffold_1: 36994808-37002894 Theobroma cacao
Thecc1EG005509 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37001895-37002894 Theobroma cacao
Thecc1EG005509 2.0kb upstream 2.0kb upstream 9087 true scaffold_1: 36992808-37001894 Theobroma cacao
Thecc1EG005509 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36992808-36994807 Theobroma cacao
Thecc1EG005509 2.0kb downstream 2.0kb downstream 9087 true scaffold_1: 36994808-37003894 Theobroma cacao
Thecc1EG005509 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37001895-37003894 Theobroma cacao
Thecc1EG005509 5.0kb upstream 5.0kb upstream 12087 true scaffold_1: 36989808-37001894 Theobroma cacao
Thecc1EG005509 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36989808-36994807 Theobroma cacao
Thecc1EG005509 5.0kb downstream 5.0kb downstream 12087 true scaffold_1: 36994808-37006894 Theobroma cacao
Thecc1EG005509 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37001895-37006894 Theobroma cacao
Thecc1EG005509 10.0kb upstream 10.0kb upstream 17087 true scaffold_1: 36984808-37001894 Theobroma cacao
Thecc1EG005509 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36984808-36994807 Theobroma cacao
Thecc1EG005509 10.0kb downstream 10.0kb downstream 17087 true scaffold_1: 36994808-37011894 Theobroma cacao
Thecc1EG005509 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37001895-37011894 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832093 5264 Brassicales-Malvales View MSA
124346015 5266 SBM View MSA
124237954 5268 Malvidae View MSA
124065109 5270 Rosid View MSA
123746123 5271 Pentapetalae View MSA
122786375 5272 Eudicot View MSA
122050480 5273 Angiosperm View MSA
121345940 5274 Embryophyte View MSA
123427822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain