Gene : Thecc1EG005496 T. cacao v1.1
Defline:  (1 of 1) PTHR31529//PTHR31529:SF3 - FAMILY NOT NAMED // LOB DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  3713
Name:  ? Thecc1EG005496 Secondary Identifier:  ? PAC:27434680
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005496 0.5kb upstream 0.5kb upstream 2818 true scaffold_1: 36938242-36941059 Theobroma cacao
Thecc1EG005496 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36940560-36941059 Theobroma cacao
Thecc1EG005496 0.5kb downstream 0.5kb downstream 2818 true scaffold_1: 36937742-36940559 Theobroma cacao
Thecc1EG005496 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36937742-36938241 Theobroma cacao
Thecc1EG005496 1.0kb upstream 1.0kb upstream 3318 true scaffold_1: 36938242-36941559 Theobroma cacao
Thecc1EG005496 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36940560-36941559 Theobroma cacao
Thecc1EG005496 1.0kb downstream 1.0kb downstream 3318 true scaffold_1: 36937242-36940559 Theobroma cacao
Thecc1EG005496 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36937242-36938241 Theobroma cacao
Thecc1EG005496 2.0kb upstream 2.0kb upstream 4318 true scaffold_1: 36938242-36942559 Theobroma cacao
Thecc1EG005496 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36940560-36942559 Theobroma cacao
Thecc1EG005496 2.0kb downstream 2.0kb downstream 4318 true scaffold_1: 36936242-36940559 Theobroma cacao
Thecc1EG005496 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36936242-36938241 Theobroma cacao
Thecc1EG005496 5.0kb upstream 5.0kb upstream 7318 true scaffold_1: 36938242-36945559 Theobroma cacao
Thecc1EG005496 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36940560-36945559 Theobroma cacao
Thecc1EG005496 5.0kb downstream 5.0kb downstream 7318 true scaffold_1: 36933242-36940559 Theobroma cacao
Thecc1EG005496 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36933242-36938241 Theobroma cacao
Thecc1EG005496 10.0kb upstream 10.0kb upstream 12318 true scaffold_1: 36938242-36950559 Theobroma cacao
Thecc1EG005496 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36940560-36950559 Theobroma cacao
Thecc1EG005496 10.0kb downstream 10.0kb downstream 12318 true scaffold_1: 36928242-36940559 Theobroma cacao
Thecc1EG005496 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36928242-36938241 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835040 5264 Brassicales-Malvales View MSA
124342816 5266 SBM View MSA
124253625 5268 Malvidae View MSA
124061672 5270 Rosid View MSA
123743730 5271 Pentapetalae View MSA
122791907 5272 Eudicot View MSA
122045879 5273 Angiosperm View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain