Gene : Thecc1EG005699 T. cacao v1.1
Defline:  (1 of 1) PTHR31296:SF1 - UPF0565 PROTEIN C2ORF69 Genomic Order:  3889
Name:  ? Thecc1EG005699 Secondary Identifier:  ? PAC:27431492
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005699 0.5kb upstream 0.5kb upstream 2475 true scaffold_1: 37857605-37860079 Theobroma cacao
Thecc1EG005699 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37859580-37860079 Theobroma cacao
Thecc1EG005699 0.5kb downstream 0.5kb downstream 2475 true scaffold_1: 37857105-37859579 Theobroma cacao
Thecc1EG005699 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37857105-37857604 Theobroma cacao
Thecc1EG005699 1.0kb upstream 1.0kb upstream 2975 true scaffold_1: 37857605-37860579 Theobroma cacao
Thecc1EG005699 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37859580-37860579 Theobroma cacao
Thecc1EG005699 1.0kb downstream 1.0kb downstream 2975 true scaffold_1: 37856605-37859579 Theobroma cacao
Thecc1EG005699 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37856605-37857604 Theobroma cacao
Thecc1EG005699 2.0kb upstream 2.0kb upstream 3975 true scaffold_1: 37857605-37861579 Theobroma cacao
Thecc1EG005699 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37859580-37861579 Theobroma cacao
Thecc1EG005699 2.0kb downstream 2.0kb downstream 3975 true scaffold_1: 37855605-37859579 Theobroma cacao
Thecc1EG005699 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37855605-37857604 Theobroma cacao
Thecc1EG005699 5.0kb upstream 5.0kb upstream 6975 true scaffold_1: 37857605-37864579 Theobroma cacao
Thecc1EG005699 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37859580-37864579 Theobroma cacao
Thecc1EG005699 5.0kb downstream 5.0kb downstream 6975 true scaffold_1: 37852605-37859579 Theobroma cacao
Thecc1EG005699 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37852605-37857604 Theobroma cacao
Thecc1EG005699 10.0kb upstream 10.0kb upstream 11975 true scaffold_1: 37857605-37869579 Theobroma cacao
Thecc1EG005699 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37859580-37869579 Theobroma cacao
Thecc1EG005699 10.0kb downstream 10.0kb downstream 11975 true scaffold_1: 37847605-37859579 Theobroma cacao
Thecc1EG005699 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37847605-37857604 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837100 5264 Brassicales-Malvales View MSA
124344504 5266 SBM View MSA
124241137 5268 Malvidae View MSA
124067647 5270 Rosid View MSA
123739442 5271 Pentapetalae View MSA
122787900 5272 Eudicot View MSA
122048933 5273 Angiosperm View MSA
121346083 5274 Embryophyte View MSA
123425579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain