Gene : Thecc1EG005627 T. cacao v1.1
Defline:  (1 of 2) PTHR11941:SF48 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL Genomic Order:  3826
Name:  ? Thecc1EG005627 Secondary Identifier:  ? PAC:27435209
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7574 Theobroma cacao pathologic  
Tcacao VALDEG-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005627 0.5kb upstream 0.5kb upstream 4045 true scaffold_1: 37537414-37541458 Theobroma cacao
Thecc1EG005627 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37537414-37537913 Theobroma cacao
Thecc1EG005627 0.5kb downstream 0.5kb downstream 4045 true scaffold_1: 37537914-37541958 Theobroma cacao
Thecc1EG005627 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37541459-37541958 Theobroma cacao
Thecc1EG005627 1.0kb upstream 1.0kb upstream 4545 true scaffold_1: 37536914-37541458 Theobroma cacao
Thecc1EG005627 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37536914-37537913 Theobroma cacao
Thecc1EG005627 1.0kb downstream 1.0kb downstream 4545 true scaffold_1: 37537914-37542458 Theobroma cacao
Thecc1EG005627 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37541459-37542458 Theobroma cacao
Thecc1EG005627 2.0kb upstream 2.0kb upstream 5545 true scaffold_1: 37535914-37541458 Theobroma cacao
Thecc1EG005627 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37535914-37537913 Theobroma cacao
Thecc1EG005627 2.0kb downstream 2.0kb downstream 5545 true scaffold_1: 37537914-37543458 Theobroma cacao
Thecc1EG005627 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37541459-37543458 Theobroma cacao
Thecc1EG005627 5.0kb upstream 5.0kb upstream 8545 true scaffold_1: 37532914-37541458 Theobroma cacao
Thecc1EG005627 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37532914-37537913 Theobroma cacao
Thecc1EG005627 5.0kb downstream 5.0kb downstream 8545 true scaffold_1: 37537914-37546458 Theobroma cacao
Thecc1EG005627 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37541459-37546458 Theobroma cacao
Thecc1EG005627 10.0kb upstream 10.0kb upstream 13545 true scaffold_1: 37527914-37541458 Theobroma cacao
Thecc1EG005627 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37527914-37537913 Theobroma cacao
Thecc1EG005627 10.0kb downstream 10.0kb downstream 13545 true scaffold_1: 37537914-37551458 Theobroma cacao
Thecc1EG005627 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37541459-37551458 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827340 5264 Brassicales-Malvales View MSA
124337150 5266 SBM View MSA
124239754 5268 Malvidae View MSA
124065753 5270 Rosid View MSA
123742938 5271 Pentapetalae View MSA
122794700 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain