Gene : Thecc1EG005788 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3968
Name:  ? Thecc1EG005788 Secondary Identifier:  ? PAC:27436779
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005788 0.5kb upstream 0.5kb upstream 4043 true scaffold_1: 38251066-38255108 Theobroma cacao
Thecc1EG005788 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38254609-38255108 Theobroma cacao
Thecc1EG005788 0.5kb downstream 0.5kb downstream 4043 true scaffold_1: 38250566-38254608 Theobroma cacao
Thecc1EG005788 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38250566-38251065 Theobroma cacao
Thecc1EG005788 1.0kb upstream 1.0kb upstream 4543 true scaffold_1: 38251066-38255608 Theobroma cacao
Thecc1EG005788 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38254609-38255608 Theobroma cacao
Thecc1EG005788 1.0kb downstream 1.0kb downstream 4543 true scaffold_1: 38250066-38254608 Theobroma cacao
Thecc1EG005788 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38250066-38251065 Theobroma cacao
Thecc1EG005788 2.0kb upstream 2.0kb upstream 5543 true scaffold_1: 38251066-38256608 Theobroma cacao
Thecc1EG005788 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38254609-38256608 Theobroma cacao
Thecc1EG005788 2.0kb downstream 2.0kb downstream 5543 true scaffold_1: 38249066-38254608 Theobroma cacao
Thecc1EG005788 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38249066-38251065 Theobroma cacao
Thecc1EG005788 5.0kb upstream 5.0kb upstream 8543 true scaffold_1: 38251066-38259608 Theobroma cacao
Thecc1EG005788 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38254609-38259608 Theobroma cacao
Thecc1EG005788 5.0kb downstream 5.0kb downstream 8543 true scaffold_1: 38246066-38254608 Theobroma cacao
Thecc1EG005788 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38246066-38251065 Theobroma cacao
Thecc1EG005788 10.0kb upstream 10.0kb upstream 13543 true scaffold_1: 38251066-38264608 Theobroma cacao
Thecc1EG005788 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38254609-38264608 Theobroma cacao
Thecc1EG005788 10.0kb downstream 10.0kb downstream 13543 true scaffold_1: 38241066-38254608 Theobroma cacao
Thecc1EG005788 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38241066-38251065 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826930 5264 Brassicales-Malvales View MSA
124348011 5266 SBM View MSA
124245757 5268 Malvidae View MSA
124072513 5270 Rosid View MSA
123747473 5271 Pentapetalae View MSA
122794645 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain