Gene : Thecc1EG042353 T. cacao v1.1
Defline:  (1 of 2) PTHR12899//PTHR12899:SF7 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL // SUBFAMILY NOT NAMED Genomic Order:  21
Name:  ? Thecc1EG042353 Secondary Identifier:  ? PAC:27442653
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042353 0.5kb upstream 0.5kb upstream 1672 true scaffold_10r: 154456-156127 Theobroma cacao
Thecc1EG042353 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 154456-154955 Theobroma cacao
Thecc1EG042353 0.5kb downstream 0.5kb downstream 1672 true scaffold_10r: 154956-156627 Theobroma cacao
Thecc1EG042353 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 156128-156627 Theobroma cacao
Thecc1EG042353 1.0kb upstream 1.0kb upstream 2172 true scaffold_10r: 153956-156127 Theobroma cacao
Thecc1EG042353 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 153956-154955 Theobroma cacao
Thecc1EG042353 1.0kb downstream 1.0kb downstream 2172 true scaffold_10r: 154956-157127 Theobroma cacao
Thecc1EG042353 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 156128-157127 Theobroma cacao
Thecc1EG042353 2.0kb upstream 2.0kb upstream 3172 true scaffold_10r: 152956-156127 Theobroma cacao
Thecc1EG042353 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 152956-154955 Theobroma cacao
Thecc1EG042353 2.0kb downstream 2.0kb downstream 3172 true scaffold_10r: 154956-158127 Theobroma cacao
Thecc1EG042353 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 156128-158127 Theobroma cacao
Thecc1EG042353 5.0kb upstream 5.0kb upstream 6172 true scaffold_10r: 149956-156127 Theobroma cacao
Thecc1EG042353 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 149956-154955 Theobroma cacao
Thecc1EG042353 5.0kb downstream 5.0kb downstream 6172 true scaffold_10r: 154956-161127 Theobroma cacao
Thecc1EG042353 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 156128-161127 Theobroma cacao
Thecc1EG042353 10.0kb upstream 10.0kb upstream 11172 true scaffold_10r: 144956-156127 Theobroma cacao
Thecc1EG042353 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 144956-154955 Theobroma cacao
Thecc1EG042353 10.0kb downstream 10.0kb downstream 11172 true scaffold_10r: 154956-166127 Theobroma cacao
Thecc1EG042353 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 156128-166127 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816515 5264 Brassicales-Malvales Singleton cluster - no MSA
124312911 5266 SBM Singleton cluster - no MSA
124162055 5268 Malvidae Singleton cluster - no MSA
123885977 5270 Rosid Singleton cluster - no MSA
123468518 5271 Pentapetalae Singleton cluster - no MSA
122503814 5272 Eudicot Singleton cluster - no MSA
122044038 5273 Angiosperm View MSA
121345131 5274 Embryophyte View MSA
123428536 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain