Gene : Thecc1EG005933 T. cacao v1.1
Defline:  (1 of 1) PTHR10024//PTHR10024:SF256 - SYNAPTOTAGMIN // C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  4099
Name:  ? Thecc1EG005933 Secondary Identifier:  ? PAC:27434922
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005933 0.5kb upstream 0.5kb upstream 5233 true scaffold_1: 38864206-38869438 Theobroma cacao
Thecc1EG005933 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38868939-38869438 Theobroma cacao
Thecc1EG005933 0.5kb downstream 0.5kb downstream 5233 true scaffold_1: 38863706-38868938 Theobroma cacao
Thecc1EG005933 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38863706-38864205 Theobroma cacao
Thecc1EG005933 1.0kb upstream 1.0kb upstream 5733 true scaffold_1: 38864206-38869938 Theobroma cacao
Thecc1EG005933 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38868939-38869938 Theobroma cacao
Thecc1EG005933 1.0kb downstream 1.0kb downstream 5733 true scaffold_1: 38863206-38868938 Theobroma cacao
Thecc1EG005933 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38863206-38864205 Theobroma cacao
Thecc1EG005933 2.0kb upstream 2.0kb upstream 6733 true scaffold_1: 38864206-38870938 Theobroma cacao
Thecc1EG005933 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38868939-38870938 Theobroma cacao
Thecc1EG005933 2.0kb downstream 2.0kb downstream 6733 true scaffold_1: 38862206-38868938 Theobroma cacao
Thecc1EG005933 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38862206-38864205 Theobroma cacao
Thecc1EG005933 5.0kb upstream 5.0kb upstream 9733 true scaffold_1: 38864206-38873938 Theobroma cacao
Thecc1EG005933 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38868939-38873938 Theobroma cacao
Thecc1EG005933 5.0kb downstream 5.0kb downstream 9733 true scaffold_1: 38859206-38868938 Theobroma cacao
Thecc1EG005933 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38859206-38864205 Theobroma cacao
Thecc1EG005933 10.0kb upstream 10.0kb upstream 14733 true scaffold_1: 38864206-38878938 Theobroma cacao
Thecc1EG005933 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38868939-38878938 Theobroma cacao
Thecc1EG005933 10.0kb downstream 10.0kb downstream 14733 true scaffold_1: 38854206-38868938 Theobroma cacao
Thecc1EG005933 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38854206-38864205 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834140 5264 Brassicales-Malvales View MSA
124341746 5266 SBM View MSA
124244476 5268 Malvidae View MSA
124069332 5270 Rosid View MSA
123741936 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain