Gene : Thecc1EG042389 T. cacao v1.1
Defline:  (1 of 1) PTHR22844//PTHR22844:SF223 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  52
Name:  ? Thecc1EG042389 Secondary Identifier:  ? PAC:27441510
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042389 0.5kb upstream 0.5kb upstream 2285 true scaffold_10r: 324276-326560 Theobroma cacao
Thecc1EG042389 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 326061-326560 Theobroma cacao
Thecc1EG042389 0.5kb downstream 0.5kb downstream 2285 true scaffold_10r: 323776-326060 Theobroma cacao
Thecc1EG042389 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 323776-324275 Theobroma cacao
Thecc1EG042389 1.0kb upstream 1.0kb upstream 2785 true scaffold_10r: 324276-327060 Theobroma cacao
Thecc1EG042389 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 326061-327060 Theobroma cacao
Thecc1EG042389 1.0kb downstream 1.0kb downstream 2785 true scaffold_10r: 323276-326060 Theobroma cacao
Thecc1EG042389 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 323276-324275 Theobroma cacao
Thecc1EG042389 2.0kb upstream 2.0kb upstream 3785 true scaffold_10r: 324276-328060 Theobroma cacao
Thecc1EG042389 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 326061-328060 Theobroma cacao
Thecc1EG042389 2.0kb downstream 2.0kb downstream 3785 true scaffold_10r: 322276-326060 Theobroma cacao
Thecc1EG042389 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 322276-324275 Theobroma cacao
Thecc1EG042389 5.0kb upstream 5.0kb upstream 6785 true scaffold_10r: 324276-331060 Theobroma cacao
Thecc1EG042389 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 326061-331060 Theobroma cacao
Thecc1EG042389 5.0kb downstream 5.0kb downstream 6785 true scaffold_10r: 319276-326060 Theobroma cacao
Thecc1EG042389 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 319276-324275 Theobroma cacao
Thecc1EG042389 10.0kb upstream 10.0kb upstream 11785 true scaffold_10r: 324276-336060 Theobroma cacao
Thecc1EG042389 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 326061-336060 Theobroma cacao
Thecc1EG042389 10.0kb downstream 10.0kb downstream 11785 true scaffold_10r: 314276-326060 Theobroma cacao
Thecc1EG042389 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 314276-324275 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840486 5264 Brassicales-Malvales View MSA
124341932 5266 SBM View MSA
124253665 5268 Malvidae View MSA
124065693 5270 Rosid View MSA
123747127 5271 Pentapetalae View MSA
122788104 5272 Eudicot View MSA
122046676 5273 Angiosperm View MSA
121349705 5274 Embryophyte View MSA
123428719 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain