Gene : Thecc1EG042568 T. cacao v1.1
Defline:  (1 of 1) PTHR19957:SF117 - SYNTAXIN-31 Genomic Order:  218
Name:  ? Thecc1EG042568 Secondary Identifier:  ? PAC:27443594
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042568 0.5kb upstream 0.5kb upstream 4399 true scaffold_10r: 1205182-1209580 Theobroma cacao
Thecc1EG042568 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 1209081-1209580 Theobroma cacao
Thecc1EG042568 0.5kb downstream 0.5kb downstream 4399 true scaffold_10r: 1204682-1209080 Theobroma cacao
Thecc1EG042568 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 1204682-1205181 Theobroma cacao
Thecc1EG042568 1.0kb upstream 1.0kb upstream 4899 true scaffold_10r: 1205182-1210080 Theobroma cacao
Thecc1EG042568 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 1209081-1210080 Theobroma cacao
Thecc1EG042568 1.0kb downstream 1.0kb downstream 4899 true scaffold_10r: 1204182-1209080 Theobroma cacao
Thecc1EG042568 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 1204182-1205181 Theobroma cacao
Thecc1EG042568 2.0kb upstream 2.0kb upstream 5899 true scaffold_10r: 1205182-1211080 Theobroma cacao
Thecc1EG042568 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 1209081-1211080 Theobroma cacao
Thecc1EG042568 2.0kb downstream 2.0kb downstream 5899 true scaffold_10r: 1203182-1209080 Theobroma cacao
Thecc1EG042568 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 1203182-1205181 Theobroma cacao
Thecc1EG042568 5.0kb upstream 5.0kb upstream 8899 true scaffold_10r: 1205182-1214080 Theobroma cacao
Thecc1EG042568 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 1209081-1214080 Theobroma cacao
Thecc1EG042568 5.0kb downstream 5.0kb downstream 8899 true scaffold_10r: 1200182-1209080 Theobroma cacao
Thecc1EG042568 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 1200182-1205181 Theobroma cacao
Thecc1EG042568 10.0kb upstream 10.0kb upstream 13899 true scaffold_10r: 1205182-1219080 Theobroma cacao
Thecc1EG042568 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 1209081-1219080 Theobroma cacao
Thecc1EG042568 10.0kb downstream 10.0kb downstream 13899 true scaffold_10r: 1195182-1209080 Theobroma cacao
Thecc1EG042568 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 1195182-1205181 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832817 5264 Brassicales-Malvales View MSA
124345635 5266 SBM View MSA
124237514 5268 Malvidae View MSA
124069079 5270 Rosid View MSA
123747067 5271 Pentapetalae View MSA
122787629 5272 Eudicot View MSA
122042562 5273 Angiosperm View MSA
121309986 5274 Embryophyte View MSA
123347598 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain