Gene : Thecc1EG042784 T. cacao v1.1

Defline:  (1 of 1) PTHR31992//PTHR31992:SF26 - FAMILY NOT NAMED // DOF ZINC FINGER PROTEIN DOF2.4 Genomic Order:  413
Name:  ? Thecc1EG042784 Secondary Identifier:  ? PAC:27442666

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042784 0.5kb upstream 0.5kb upstream 2748 true scaffold_10r: 2241028-2243775 Theobroma cacao
Thecc1EG042784 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 2243276-2243775 Theobroma cacao
Thecc1EG042784 0.5kb downstream 0.5kb downstream 2748 true scaffold_10r: 2240528-2243275 Theobroma cacao
Thecc1EG042784 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 2240528-2241027 Theobroma cacao
Thecc1EG042784 1.0kb upstream 1.0kb upstream 3248 true scaffold_10r: 2241028-2244275 Theobroma cacao
Thecc1EG042784 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 2243276-2244275 Theobroma cacao
Thecc1EG042784 1.0kb downstream 1.0kb downstream 3248 true scaffold_10r: 2240028-2243275 Theobroma cacao
Thecc1EG042784 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 2240028-2241027 Theobroma cacao
Thecc1EG042784 2.0kb upstream 2.0kb upstream 4248 true scaffold_10r: 2241028-2245275 Theobroma cacao
Thecc1EG042784 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 2243276-2245275 Theobroma cacao
Thecc1EG042784 2.0kb downstream 2.0kb downstream 4248 true scaffold_10r: 2239028-2243275 Theobroma cacao
Thecc1EG042784 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 2239028-2241027 Theobroma cacao
Thecc1EG042784 5.0kb upstream 5.0kb upstream 7248 true scaffold_10r: 2241028-2248275 Theobroma cacao
Thecc1EG042784 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 2243276-2248275 Theobroma cacao
Thecc1EG042784 5.0kb downstream 5.0kb downstream 7248 true scaffold_10r: 2236028-2243275 Theobroma cacao
Thecc1EG042784 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 2236028-2241027 Theobroma cacao
Thecc1EG042784 10.0kb upstream 10.0kb upstream 12248 true scaffold_10r: 2241028-2253275 Theobroma cacao
Thecc1EG042784 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 2243276-2253275 Theobroma cacao
Thecc1EG042784 10.0kb downstream 10.0kb downstream 12248 true scaffold_10r: 2231028-2243275 Theobroma cacao
Thecc1EG042784 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 2231028-2241027 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841352 5264 Brassicales-Malvales View MSA
124341650 5266 SBM View MSA
124248086 5268 Malvidae View MSA
124069853 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain