Gene : Thecc1EG042732 T. cacao v1.1
Defline:  (1 of 2) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  366
Name:  ? Thecc1EG042732 Secondary Identifier:  ? PAC:27442066
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042732 0.5kb upstream 0.5kb upstream 3699 true scaffold_10r: 2017701-2021399 Theobroma cacao
Thecc1EG042732 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 2017701-2018200 Theobroma cacao
Thecc1EG042732 0.5kb downstream 0.5kb downstream 3699 true scaffold_10r: 2018201-2021899 Theobroma cacao
Thecc1EG042732 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 2021400-2021899 Theobroma cacao
Thecc1EG042732 1.0kb upstream 1.0kb upstream 4199 true scaffold_10r: 2017201-2021399 Theobroma cacao
Thecc1EG042732 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 2017201-2018200 Theobroma cacao
Thecc1EG042732 1.0kb downstream 1.0kb downstream 4199 true scaffold_10r: 2018201-2022399 Theobroma cacao
Thecc1EG042732 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 2021400-2022399 Theobroma cacao
Thecc1EG042732 2.0kb upstream 2.0kb upstream 5199 true scaffold_10r: 2016201-2021399 Theobroma cacao
Thecc1EG042732 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 2016201-2018200 Theobroma cacao
Thecc1EG042732 2.0kb downstream 2.0kb downstream 5199 true scaffold_10r: 2018201-2023399 Theobroma cacao
Thecc1EG042732 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 2021400-2023399 Theobroma cacao
Thecc1EG042732 5.0kb upstream 5.0kb upstream 8199 true scaffold_10r: 2013201-2021399 Theobroma cacao
Thecc1EG042732 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 2013201-2018200 Theobroma cacao
Thecc1EG042732 5.0kb downstream 5.0kb downstream 8199 true scaffold_10r: 2018201-2026399 Theobroma cacao
Thecc1EG042732 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 2021400-2026399 Theobroma cacao
Thecc1EG042732 10.0kb upstream 10.0kb upstream 13199 true scaffold_10r: 2008201-2021399 Theobroma cacao
Thecc1EG042732 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 2008201-2018200 Theobroma cacao
Thecc1EG042732 10.0kb downstream 10.0kb downstream 13199 true scaffold_10r: 2018201-2031399 Theobroma cacao
Thecc1EG042732 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 2021400-2031399 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830940 5264 Brassicales-Malvales View MSA
124347374 5266 SBM View MSA
124237000 5268 Malvidae View MSA
124068801 5270 Rosid View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain