Gene : Thecc1EG042957 T. cacao v1.1
Defline:  (1 of 1) PTHR22600//PTHR22600:SF16 - BETA-HEXOSAMINIDASE // BETA-HEXOSAMINIDASE 1 Genomic Order:  545
Name:  ? Thecc1EG042957 Secondary Identifier:  ? PAC:27443362
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042957 0.5kb upstream 0.5kb upstream 8508 true scaffold_10r: 3156258-3164765 Theobroma cacao
Thecc1EG042957 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 3164266-3164765 Theobroma cacao
Thecc1EG042957 0.5kb downstream 0.5kb downstream 8508 true scaffold_10r: 3155758-3164265 Theobroma cacao
Thecc1EG042957 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 3155758-3156257 Theobroma cacao
Thecc1EG042957 1.0kb upstream 1.0kb upstream 9008 true scaffold_10r: 3156258-3165265 Theobroma cacao
Thecc1EG042957 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 3164266-3165265 Theobroma cacao
Thecc1EG042957 1.0kb downstream 1.0kb downstream 9008 true scaffold_10r: 3155258-3164265 Theobroma cacao
Thecc1EG042957 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 3155258-3156257 Theobroma cacao
Thecc1EG042957 2.0kb upstream 2.0kb upstream 10008 true scaffold_10r: 3156258-3166265 Theobroma cacao
Thecc1EG042957 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 3164266-3166265 Theobroma cacao
Thecc1EG042957 2.0kb downstream 2.0kb downstream 10008 true scaffold_10r: 3154258-3164265 Theobroma cacao
Thecc1EG042957 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 3154258-3156257 Theobroma cacao
Thecc1EG042957 5.0kb upstream 5.0kb upstream 13008 true scaffold_10r: 3156258-3169265 Theobroma cacao
Thecc1EG042957 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 3164266-3169265 Theobroma cacao
Thecc1EG042957 5.0kb downstream 5.0kb downstream 13008 true scaffold_10r: 3151258-3164265 Theobroma cacao
Thecc1EG042957 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 3151258-3156257 Theobroma cacao
Thecc1EG042957 10.0kb upstream 10.0kb upstream 18008 true scaffold_10r: 3156258-3174265 Theobroma cacao
Thecc1EG042957 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 3164266-3174265 Theobroma cacao
Thecc1EG042957 10.0kb downstream 10.0kb downstream 18008 true scaffold_10r: 3146258-3164265 Theobroma cacao
Thecc1EG042957 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 3146258-3156257 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827865 5264 Brassicales-Malvales View MSA
124345307 5266 SBM View MSA
124237897 5268 Malvidae View MSA
124068580 5270 Rosid View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain