Gene : Thecc1EG043281 T. cacao v1.1
Defline:  (1 of 1) PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Genomic Order:  795
Name:  ? Thecc1EG043281 Secondary Identifier:  ? PAC:27441829
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6441 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043281 0.5kb upstream 0.5kb upstream 5485 true scaffold_10r: 4969538-4975022 Theobroma cacao
Thecc1EG043281 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 4969538-4970037 Theobroma cacao
Thecc1EG043281 0.5kb downstream 0.5kb downstream 5485 true scaffold_10r: 4970038-4975522 Theobroma cacao
Thecc1EG043281 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 4975023-4975522 Theobroma cacao
Thecc1EG043281 1.0kb upstream 1.0kb upstream 5985 true scaffold_10r: 4969038-4975022 Theobroma cacao
Thecc1EG043281 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 4969038-4970037 Theobroma cacao
Thecc1EG043281 1.0kb downstream 1.0kb downstream 5985 true scaffold_10r: 4970038-4976022 Theobroma cacao
Thecc1EG043281 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 4975023-4976022 Theobroma cacao
Thecc1EG043281 2.0kb upstream 2.0kb upstream 6985 true scaffold_10r: 4968038-4975022 Theobroma cacao
Thecc1EG043281 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 4968038-4970037 Theobroma cacao
Thecc1EG043281 2.0kb downstream 2.0kb downstream 6985 true scaffold_10r: 4970038-4977022 Theobroma cacao
Thecc1EG043281 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 4975023-4977022 Theobroma cacao
Thecc1EG043281 5.0kb upstream 5.0kb upstream 9985 true scaffold_10r: 4965038-4975022 Theobroma cacao
Thecc1EG043281 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 4965038-4970037 Theobroma cacao
Thecc1EG043281 5.0kb downstream 5.0kb downstream 9985 true scaffold_10r: 4970038-4980022 Theobroma cacao
Thecc1EG043281 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 4975023-4980022 Theobroma cacao
Thecc1EG043281 10.0kb upstream 10.0kb upstream 14985 true scaffold_10r: 4960038-4975022 Theobroma cacao
Thecc1EG043281 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 4960038-4970037 Theobroma cacao
Thecc1EG043281 10.0kb downstream 10.0kb downstream 14985 true scaffold_10r: 4970038-4985022 Theobroma cacao
Thecc1EG043281 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 4975023-4985022 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830834 5264 Brassicales-Malvales View MSA
124341216 5266 SBM View MSA
124237182 5268 Malvidae View MSA
124068541 5270 Rosid View MSA
123736657 5271 Pentapetalae View MSA
122791898 5272 Eudicot View MSA
122046966 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain