Gene : Thecc1EG043266 T. cacao v1.1
Defline:  (1 of 1) PTHR11679:SF1 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 33B Genomic Order:  785
Name:  ? Thecc1EG043266 Secondary Identifier:  ? PAC:27441600
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043266 0.5kb upstream 0.5kb upstream 9875 true scaffold_10r: 4855760-4865634 Theobroma cacao
Thecc1EG043266 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 4865135-4865634 Theobroma cacao
Thecc1EG043266 0.5kb downstream 0.5kb downstream 9875 true scaffold_10r: 4855260-4865134 Theobroma cacao
Thecc1EG043266 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 4855260-4855759 Theobroma cacao
Thecc1EG043266 1.0kb upstream 1.0kb upstream 10375 true scaffold_10r: 4855760-4866134 Theobroma cacao
Thecc1EG043266 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 4865135-4866134 Theobroma cacao
Thecc1EG043266 1.0kb downstream 1.0kb downstream 10375 true scaffold_10r: 4854760-4865134 Theobroma cacao
Thecc1EG043266 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 4854760-4855759 Theobroma cacao
Thecc1EG043266 2.0kb upstream 2.0kb upstream 11375 true scaffold_10r: 4855760-4867134 Theobroma cacao
Thecc1EG043266 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 4865135-4867134 Theobroma cacao
Thecc1EG043266 2.0kb downstream 2.0kb downstream 11375 true scaffold_10r: 4853760-4865134 Theobroma cacao
Thecc1EG043266 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 4853760-4855759 Theobroma cacao
Thecc1EG043266 5.0kb upstream 5.0kb upstream 14375 true scaffold_10r: 4855760-4870134 Theobroma cacao
Thecc1EG043266 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 4865135-4870134 Theobroma cacao
Thecc1EG043266 5.0kb downstream 5.0kb downstream 14375 true scaffold_10r: 4850760-4865134 Theobroma cacao
Thecc1EG043266 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 4850760-4855759 Theobroma cacao
Thecc1EG043266 10.0kb upstream 10.0kb upstream 19375 true scaffold_10r: 4855760-4875134 Theobroma cacao
Thecc1EG043266 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 4865135-4875134 Theobroma cacao
Thecc1EG043266 10.0kb downstream 10.0kb downstream 19375 true scaffold_10r: 4845760-4865134 Theobroma cacao
Thecc1EG043266 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 4845760-4855759 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828237 5264 Brassicales-Malvales View MSA
124337921 5266 SBM View MSA
124254654 5268 Malvidae View MSA
124060687 5270 Rosid View MSA
123752056 5271 Pentapetalae View MSA
122787734 5272 Eudicot View MSA
122044199 5273 Angiosperm View MSA
121343889 5274 Embryophyte View MSA
123428072 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain