Gene : Thecc1EG043216 T. cacao v1.1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF18 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  756
Name:  ? Thecc1EG043216 Secondary Identifier:  ? PAC:27443462
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043216 0.5kb upstream 0.5kb upstream 10021 true scaffold_10r: 4641716-4651736 Theobroma cacao
Thecc1EG043216 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 4641716-4642215 Theobroma cacao
Thecc1EG043216 0.5kb downstream 0.5kb downstream 10021 true scaffold_10r: 4642216-4652236 Theobroma cacao
Thecc1EG043216 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 4651737-4652236 Theobroma cacao
Thecc1EG043216 1.0kb upstream 1.0kb upstream 10521 true scaffold_10r: 4641216-4651736 Theobroma cacao
Thecc1EG043216 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 4641216-4642215 Theobroma cacao
Thecc1EG043216 1.0kb downstream 1.0kb downstream 10521 true scaffold_10r: 4642216-4652736 Theobroma cacao
Thecc1EG043216 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 4651737-4652736 Theobroma cacao
Thecc1EG043216 2.0kb upstream 2.0kb upstream 11521 true scaffold_10r: 4640216-4651736 Theobroma cacao
Thecc1EG043216 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 4640216-4642215 Theobroma cacao
Thecc1EG043216 2.0kb downstream 2.0kb downstream 11521 true scaffold_10r: 4642216-4653736 Theobroma cacao
Thecc1EG043216 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 4651737-4653736 Theobroma cacao
Thecc1EG043216 5.0kb upstream 5.0kb upstream 14521 true scaffold_10r: 4637216-4651736 Theobroma cacao
Thecc1EG043216 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 4637216-4642215 Theobroma cacao
Thecc1EG043216 5.0kb downstream 5.0kb downstream 14521 true scaffold_10r: 4642216-4656736 Theobroma cacao
Thecc1EG043216 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 4651737-4656736 Theobroma cacao
Thecc1EG043216 10.0kb upstream 10.0kb upstream 19521 true scaffold_10r: 4632216-4651736 Theobroma cacao
Thecc1EG043216 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 4632216-4642215 Theobroma cacao
Thecc1EG043216 10.0kb downstream 10.0kb downstream 19521 true scaffold_10r: 4642216-4661736 Theobroma cacao
Thecc1EG043216 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 4651737-4661736 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828555 5264 Brassicales-Malvales View MSA
124339581 5266 SBM View MSA
124251680 5268 Malvidae View MSA
124066333 5270 Rosid View MSA
123743617 5271 Pentapetalae View MSA
122787682 5272 Eudicot View MSA
122042328 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain