Gene : Thecc1EG043494 T. cacao v1.1
Defline:  (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Genomic Order:  915
Name:  ? Thecc1EG043494 Secondary Identifier:  ? PAC:27441903
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043494 0.5kb upstream 0.5kb upstream 18194 true scaffold_10r: 6780704-6798897 Theobroma cacao
Thecc1EG043494 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 6798398-6798897 Theobroma cacao
Thecc1EG043494 0.5kb downstream 0.5kb downstream 18194 true scaffold_10r: 6780204-6798397 Theobroma cacao
Thecc1EG043494 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 6780204-6780703 Theobroma cacao
Thecc1EG043494 1.0kb upstream 1.0kb upstream 18694 true scaffold_10r: 6780704-6799397 Theobroma cacao
Thecc1EG043494 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 6798398-6799397 Theobroma cacao
Thecc1EG043494 1.0kb downstream 1.0kb downstream 18694 true scaffold_10r: 6779704-6798397 Theobroma cacao
Thecc1EG043494 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 6779704-6780703 Theobroma cacao
Thecc1EG043494 2.0kb upstream 2.0kb upstream 19694 true scaffold_10r: 6780704-6800397 Theobroma cacao
Thecc1EG043494 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 6798398-6800397 Theobroma cacao
Thecc1EG043494 2.0kb downstream 2.0kb downstream 19694 true scaffold_10r: 6778704-6798397 Theobroma cacao
Thecc1EG043494 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 6778704-6780703 Theobroma cacao
Thecc1EG043494 5.0kb upstream 5.0kb upstream 22694 true scaffold_10r: 6780704-6803397 Theobroma cacao
Thecc1EG043494 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 6798398-6803397 Theobroma cacao
Thecc1EG043494 5.0kb downstream 5.0kb downstream 22694 true scaffold_10r: 6775704-6798397 Theobroma cacao
Thecc1EG043494 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 6775704-6780703 Theobroma cacao
Thecc1EG043494 10.0kb upstream 10.0kb upstream 27694 true scaffold_10r: 6780704-6808397 Theobroma cacao
Thecc1EG043494 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 6798398-6808397 Theobroma cacao
Thecc1EG043494 10.0kb downstream 10.0kb downstream 27694 true scaffold_10r: 6770704-6798397 Theobroma cacao
Thecc1EG043494 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 6770704-6780703 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823768 5264 Brassicales-Malvales View MSA
124319826 5266 SBM View MSA
124168336 5268 Malvidae View MSA
124038218 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain